MirGeneDB 2.1
MirGeneDB ID

Loc-Mir-148-P3

Family name MIR-148 (all species)
Seed CAGUGCA
Species Spotted gar (Lepisosteus oculatus)
MiRBase ID
Paralogues Loc-Mir-148-P1  Loc-Mir-148-P2  Loc-Mir-148-P4 
Orthologues Ami-Mir-148-P3  Bta-Mir-148-P3  Cfa-Mir-148-P3  Cmi-Mir-148-P3  Cpi-Mir-148-P3  Cpo-Mir-148-P3  Dno-Mir-148-P3  Dre-Mir-148-P3  Ebu-Mir-148  Gmo-Mir-148-P3  Hsa-Mir-148-P3  Mal-Mir-148-P3  Mdo-Mir-148-P3  Mml-Mir-148-P3  Mmu-Mir-148-P3  Oan-Mir-148-P3  Ocu-Mir-148-P3  Rno-Mir-148-P3  Sha-Mir-148-P3  Spt-Mir-148-P3  Sto-Mir-148-P3  Tni-Mir-148-P3 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(LepOcu1)		 LG15: 8863370-8863428 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
GGACAUGCCACACAGCCGUGUCCUGAGCUGAAGUUCUGUGAUACACUUAGACUCUGAGUGUGGGGAAGUCAGUGCAUAACAGAACUUUGGCUCGGGGUGACCCCACAUCUGGAGCACCA
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Structure
        10          20        30        40        50          
GGACAUGCCACACAGCCG--|GU       UG         G  A    UA    CUGAGU 
                    U  CCUGAGC  AAGUUCUGU AU CACU  GACU      \
                    G  GGGCUCG  UUCAAGACA UA GUGA  CUGA      G
ACCACGAGGUCUACACCCCA^UG       GU         A  C    --    AGGGGU 
       110       100        90        80          70
Deep sequencing
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3' NTU Yes
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Br Br He He He He Ov Ov Ov Ov Te Te Te Te To
Star sequence

Loc-Mir-148-P3_5p*
mirBase accessionNone
Sequence 
0- AAGUUCUGUGAUACACUUAGACU -23
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Mature sequence

Loc-Mir-148-P3_3p
mirBase accessionNone
Sequence 
38- UCAGUGCAUAACAGAACUUUG -59
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