MirGeneDB 3.0
MirGeneDB ID

Xla-Mir-148-P4b

Family name MIR-148 (all species)
Species African clawed frog (Xenopus laevis)
MiRBase ID
Paralogues Xla-Mir-148-P1a  Xla-Mir-148-P1b  Xla-Mir-148-P4a 
Orthologues Aca-Mir-148-P4  Ami-Mir-148-P4  Bta-Mir-148-P4  Cfa-Mir-148-P4  Cja-Mir-148-P4  Cli-Mir-148-P4  Cmi-Mir-148-P4  Cpi-Mir-148-P4  Cpo-Mir-148-P4  Dno-Mir-148-P4  Ebu-Mir-148  Eca-Mir-148-P4  Ete-Mir-148-P4  Gga-Mir-148-P4  Gja-Mir-148-P4  Hsa-Mir-148-P4  Laf-Mir-148-P4  Lch-Mir-148-P4  Loc-Mir-148-P4  Mml-Mir-148-P4  Mmr-Mir-148-P4  Mmu-Mir-148-P4  Mun-Mir-148-P4  Neu-Mir-148-P4  Ocu-Mir-148-P4  Pab-Mir-148-P4  Pbv-Mir-148-P4  Rno-Mir-148-P4  Sha-Mir-148-P4  Spt-Mir-148-P4  Tgu-Mir-148-P4  Xtr-Mir-148-P4 
Node of Origin (locus) X. laevis
Node of Origin (family) Vertebrata
Genome context
(GCF_001663975.1_XLA_v2)		 NC_030727.1: 128198562-128198622 [-] UCSC Ensembl
Seed AAGUUCU
Precursor
(pre-Mir +30nt flank)		 
UACAUGCGAGUGUGGAACAGCGUUUGAGGUGAAGUUCUGUUAUACACUCCGGCUGUGAGUAAGUGGAAGUCAGUGCAUCACAGAACUUUGUCUCGAGGGCUUUACUGCUCCACUAAAAUGA
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Structure
        10          20        30        40        50        60 
UACAUGCGAGUGUGGAAC--|  G       UG         U  A    CC    GUGAGU 
                    AGC UUUGAGG  AAGUUCUGU AU CACU  GGCU      \
                    UCG GAGCUCU  UUCAAGACA UA GUGA  CUGA      A
AGUAAAAUCACCUCGUCAUU^  G       GU         C  C    --    AGGUGA 
 .       110       100        90        80          70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
- +
Eg Em Em He Ki Re St St
Mature sequence

Xla-Mir-148-P4b_5p
mirBase accessionNone
Sequence 
0- GAAGUUCUGUUAUACACUCCGGCU -24
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Co-mature sequence

Xla-Mir-148-P4b_3p
mirBase accessionNone
Sequence 
39- UCAGUGCAUCACAGAACUUUGU -61
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