MirGeneDB 2.1
MirGeneDB ID

Pbv-Mir-148-P4

Family name MIR-148 (all species)
Seed CAGUGCA
Species Burmese python (Python bivittatus)
MiRBase ID pbv-mir-148b
Paralogues Pbv-Mir-148-P1 
Orthologues Aca-Mir-148-P4  Ami-Mir-148-P4  Bta-Mir-148-P4  Cfa-Mir-148-P4  Cli-Mir-148-P4  Cmi-Mir-148-P4  Cpi-Mir-148-P4  Cpo-Mir-148-P4  Dno-Mir-148-P4  Ebu-Mir-148  Ete-Mir-148-P4  Gga-Mir-148-P4  Gja-Mir-148-P4  Hsa-Mir-148-P4  Lch-Mir-148-P4  Loc-Mir-148-P4  Mml-Mir-148-P4  Mmu-Mir-148-P4  Mun-Mir-148-P4  Ocu-Mir-148-P4  Rno-Mir-148-P4  Sha-Mir-148-P4  Spt-Mir-148-P4  Tgu-Mir-148-P4  Xla-Mir-148-P4a  Xla-Mir-148-P4b  Xtr-Mir-148-P4 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(GCA_000186305.2_Python_molurus_bivittatus)		 KE953059.1: 20840-20900 [+]
Precursor
(pre-Mir +30nt flank)
CCAGAGAGGACCUGUUACAGCGCUUGAGGUGAAGUUCUGUUAUACACUUUGACUGUGGCUACAUGGAAGUCAGUGCAUCACAGAACUUUGUCUCGAGAGCUUUUCAGCAUCCAGCAGGGAA
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Structure
        10          20        30        40        50        60 
CCAGAGAGGACCUGUUAC--|  G       UG         U  A    UU    GUGGCU 
                    AGC CUUGAGG  AAGUUCUGU AU CACU  GACU      \
                    UCG GAGCUCU  UUCAAGACA UA GUGA  CUGA      A
AAGGGACGACCUACGACUUU^  A       GU         C  C    --    AGGUAC 
 .       110       100        90        80          70
Deep sequencing
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CommentThere is a second Drosha cut +1 on both arms.
3' NTU No
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
-   +
To
Star sequence

Pbv-Mir-148-P4_5p*
mirBase accessionMIMAT0038966
Sequence 
0- GAAGUUCUGUUAUACACUUUGACU -24
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Mature sequence

Pbv-Mir-148-P4_3p
mirBase accessionMIMAT0038967
Sequence 
39- UCAGUGCAUCACAGAACUUUGU -61
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