MirGeneDB 2.1

MirGeneDB ID

Pbv-Mir-148-P1

Family name MIR-148 (all species)
Seed CAGUGCA
Species Burmese python (Python bivittatus)
MiRBase ID pbv-mir-148a
Paralogues Pbv-Mir-148-P4 
Orthologues Aca-Mir-148-P1  Bta-Mir-148-P1  Cfa-Mir-148-P1  Cli-Mir-148-P1  Cli-Mir-148-P1-as  Cmi-Mir-148-P1  Cpi-Mir-148-P1  Cpo-Mir-148-P1  Dno-Mir-148-P1  Ebu-Mir-148  Ete-Mir-148-P1  Gga-Mir-148-P1  Gja-Mir-148-P1  Hsa-Mir-148-P1  Lch-Mir-148-P1  Loc-Mir-148-P1  Mdo-Mir-148-P1  Mml-Mir-148-P1  Mmu-Mir-148-P1  Mun-Mir-148-P1  Oan-Mir-148-P1  Ocu-Mir-148-P1  Pma-Mir-148-o1  Rno-Mir-148-P1  Spt-Mir-148-P1  Sto-Mir-148-P1  Tgu-Mir-148-P1  Tgu-Mir-148-P1-as  Xla-Mir-148-P1a  Xla-Mir-148-P1b  Xtr-Mir-148-P1 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(GCA_000186305.2_Python_molurus_bivittatus)
KE953020.1: 321926-321987 [+]
Precursor
(pre-Mir +30nt flank)
AGUGGGGAAAGAAGUUUUGGUUUCUGGAAGCAAAGUUCUGUGACACUCGGACUCUGAUUAUAAUAGAAGUCAGUGCACUACAGAACUUUGUCUCCAGGGGCUGCAGCAGCCAAGGAGUUAAC
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Structure
        10          20        30        40          50        60
AGUGGGGAAAGAAGUUUU--   UU     AG            A--|   CG    CUGAUU 
                    GGU  CUGGA  CAAAGUUCUGUG   CACU  GACU      A
                    UCG  GACCU  GUUUCAAGACAU   GUGA  CUGA      U
CAAUUGAGGAACCGACGACG   GG     CU            CAC^   --    AGAUAA 
120       110       100        90        80          70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
 +
To
Star sequence

Pbv-Mir-148-P1_5p*

mirBase accessionMIMAT0038964
Sequence
0- CAAAGUUCUGUGACACUCGGACU -23
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Mature sequence

Pbv-Mir-148-P1_3p

mirBase accessionMIMAT0038965
Sequence
39- UCAGUGCACUACAGAACUUUGUC -62
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