MirGeneDB 2.1
MirGeneDB ID

Xla-Mir-148-P1a

Family name MIR-148 (all species)
Seed CAGUGCA
Species African clawed frog (Xenopus laevis)
MiRBase ID xla-mir-148a
Paralogues Xla-Mir-148-P1b  Xla-Mir-148-P4a  Xla-Mir-148-P4b 
Orthologues Aca-Mir-148-P1  Bta-Mir-148-P1  Cfa-Mir-148-P1  Cli-Mir-148-P1  Cli-Mir-148-P1-as  Cmi-Mir-148-P1  Cpi-Mir-148-P1  Cpo-Mir-148-P1  Dno-Mir-148-P1  Ebu-Mir-148  Ete-Mir-148-P1  Gga-Mir-148-P1  Gja-Mir-148-P1  Hsa-Mir-148-P1  Lch-Mir-148-P1  Loc-Mir-148-P1  Mdo-Mir-148-P1  Mml-Mir-148-P1  Mmu-Mir-148-P1  Mun-Mir-148-P1  Oan-Mir-148-P1  Ocu-Mir-148-P1  Pbv-Mir-148-P1  Pma-Mir-148-o1  Rno-Mir-148-P1  Spt-Mir-148-P1  Sto-Mir-148-P1  Tgu-Mir-148-P1  Tgu-Mir-148-P1-as  Xtr-Mir-148-P1 
Node of Origin (locus) X. laevis
Node of Origin (family) Vertebrata
Genome context
(GCF_001663975.1_XLA_v2)		 NC_030734.1: 38926039-38926098 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CAUGGACUUGGCUUACUAGUCUUUUAAAUCAAAGUUCUGUGACACUUCGACUCUGAAUUUGAUAGCAGUCAGUGCACUACAGAACUUUGUUUUGGGAGUCUGCCGCUUCUUCCCCCCCCC
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Structure
        10          20        30        40          50         
CAUGGACUUGGCUUACU--  U        U            A--|   UC    CUGAAU 
                   AG CUUUUAAA CAAAGUUCUGUG   CACU  GACU      U
                   UC GAGGGUUU GUUUCAAGACAU   GUGA  CUGA      U
CCCCCCCCCUUCUUCGCCG  U        U            CAC^   --    CGAUAG 
.       110       100        90        80          70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Eg He Re St St St St
Star sequence

Xla-Mir-148-P1a_5p*
mirBase accessionMIMAT0046466
Sequence 
0- AAAGUUCUGUGACACUUCGACU -22
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Mature sequence

Xla-Mir-148-P1a_3p
mirBase accessionMIMAT0046467
Sequence 
38- UCAGUGCACUACAGAACUUUGU -60
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