MirGeneDB 3.0
125 microRNA genes with seed AGGUAGU
Sort by genome coordinates Motifs
MirGeneDB ID ▼ MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) Iso­miR 3' NTU  UG  UGUG CNNC
Efe-Mir-2687 None MIR-2687 AGGUAGU None None Efet.01.83002 1888 1951 + Sedentaria Sedentaria No 1
Cte-Mir-2687 cte-mir-2687 MIR-2687 AGGUAGU MIMAT0013539 None CAPTEscaffold_610 82412 82480 - Sedentaria Sedentaria No 1
Ebu-Mir-196-P6 None MIR-196 AGGUAGU None None FYBX02009826.1 1916388 1916448 + E. burgeri Olfactores Unknown 1
Ebu-Mir-196-P5 None MIR-196 AGGUAGU None None FYBX02009525.1 1711837 1711894 - E. burgeri Olfactores Unknown 1
Xla-Mir-196-P4d V None MIR-196 AGGUAGU None None NC_030727.1 128789652 128789713 - X. laevis Olfactores 2 No 1
Xla-Mir-196-P4c V None MIR-196 AGGUAGU None None NC_030726.1 148332751 148332811 - X. laevis Olfactores 2 No 1
Dre-Mir-196-P4b dre-mir-196c MIR-196 AGGUAGU MIMAT0011298 None chr11 2190643 2190701 + Clupeocephala Olfactores No 1
Tni-Mir-196-P4a3 tni-mir-196a-1 MIR-196 AGGUAGU MIMAT0002956 None 9 4223649 4223707 + T. nigroviridis Olfactores Unknown 1
Tni-Mir-196-P4a2 tni-mir-196a-1 MIR-196 AGGUAGU MIMAT0002956 None 3 700487 700545 - T. nigroviridis Olfactores Unknown 1
Tni-Mir-196-P4a1 tni-mir-196a-1 MIR-196 AGGUAGU MIMAT0002956 None 3 685144 685202 - T. nigroviridis Olfactores Unknown 1
Mal-Mir-196-P4a None MIR-196 AGGUAGU None None KV884694.1 1840009 1840067 - Clupeocephala Olfactores Unknown 1
Gmo-Mir-196-P4a gmo-mir-196b MIR-196 AGGUAGU MIMAT0044059 None contig48991 1476 1534 + Clupeocephala Olfactores Unknown 1
Dre-Mir-196-P4a dre-mir-196a-1 MIR-196 AGGUAGU MIMAT0001276 None chr23 36088111 36088169 + Clupeocephala Olfactores No 1
Xtr-Mir-196-P4 xtr-mir-196a MIR-196 AGGUAGU MIMAT0003690 None chr2 142905384 142905444 - Gnathostomata Olfactores No 1
Tgu-Mir-196-P4 None MIR-196 AGGUAGU None None 29 2679763 2679820 + Gnathostomata Olfactores Unknown 1
Spt-Mir-196-P4 None MIR-196 AGGUAGU None None QEPC01003896.1 1321540 1321597 - Gnathostomata Olfactores Unknown 1
Sha-Mir-196-P4 None MIR-196 AGGUAGU None None GL861729.1 250515 250573 + Gnathostomata Olfactores No 1
Rno-Mir-196-P4 rno-mir-196a MIR-196 AGGUAGU MIMAT0000871 MIMAT0004737 chr7 144584259 144584317 + Gnathostomata Olfactores No 1
Pab-Mir-196-P4 None MIR-196 AGGUAGU None None CM054689.2 51790476 51790534 + Gnathostomata Olfactores Unknown 1
Ocu-Mir-196-P4 ocu-mir-196a-2 MIR-196 AGGUAGU MIMAT0048313 MIMAT0048314 chr4 37775899 37775957 + Gnathostomata Olfactores No 1
Oan-Mir-196-P4 oan-mir-196a MIR-196 AGGUAGU MIMAT0006876 MIMAT0006877 NC_041737.1 57674459 57674517 + Gnathostomata Olfactores No 1
Neu-Mir-196-P4 None MIR-196 AGGUAGU None None CM051815.1 227046879 227046937 + Gnathostomata Olfactores Unknown 1
Mun-Mir-196-P4 None MIR-196 AGGUAGU None None LR594634.1 315333089 315333146 - Gnathostomata Olfactores Unknown 1
Mmu-Mir-196-P4 mmu-mir-196a-2 MIR-196 AGGUAGU MIMAT0000518 MIMAT0004618 chr15 102973365 102973423 + Gnathostomata Olfactores No 1
Mmr-Mir-196-P4 None MIR-196 AGGUAGU None None CM007667.1 56976453 56976511 - Gnathostomata Olfactores No 1
Mml-Mir-196-P4 mml-mir-196a-2 MIR-196 AGGUAGU MIMAT0002519 MIMAT0026839 CM014346.1 53593573 53593631 + Gnathostomata Olfactores No 1
Loc-Mir-196-P4 None MIR-196 AGGUAGU None None None None None None Gnathostomata Olfactores No
Lch-Mir-196-P4 None MIR-196 AGGUAGU None None JH126829.1 1686811 1686868 - Gnathostomata Olfactores Unknown 1
Laf-Mir-196-P4 None MIR-196 AGGUAGU None None GL010029.1 40424901 40424959 + Gnathostomata Olfactores Unknown 1
Hsa-Mir-196-P4 hsa-mir-196a-2 MIR-196 AGGUAGU MIMAT0000226 MIMAT0004562 chr12 53991762 53991820 + Gnathostomata Olfactores No 1
Gja-Mir-196-P4 None MIR-196 AGGUAGU None None NW_015167536.1 481383 481440 - Gnathostomata Olfactores No 1
Gga-Mir-196-P4 gga-mir-196-3 MIR-196 AGGUAGU MIMAT0001121 None 33 7592237 7592294 + Gnathostomata Olfactores No 1
Ete-Mir-196-P4 None MIR-196 AGGUAGU None None JH980427 757096 757154 + Gnathostomata Olfactores No 1
Eca-Mir-196-P4 None MIR-196 AGGUAGU None None CM009153.1 71759182 71759240 + Gnathostomata Olfactores No 1
Dno-Mir-196-P4 dno-mir-196a MIR-196 AGGUAGU MIMAT0047729 MIMAT0047730 JH569826 1030436 1030494 + Gnathostomata Olfactores No 1
Cpo-Mir-196-P4 cpo-mir-196c MIR-196 AGGUAGU MIMAT0047080 MIMAT0047081 scaffold_9 45819379 45819437 - Gnathostomata Olfactores No 1
Cpi-Mir-196-P4 cpi-mir-196-2 MIR-196 AGGUAGU MIMAT0037815 MIMAT0037817 JH584844 1085528 1085585 - Gnathostomata Olfactores No 1
Cmi-Mir-196-P4 None MIR-196 AGGUAGU None None KI636119.1 230953 231010 + Gnathostomata Olfactores No 1
Cli-Mir-196-P4 cli-mir-196-2 MIR-196 AGGUAGU MIMAT0038570 None scaffold922 197745 197802 + Gnathostomata Olfactores No
Cja-Mir-196-P4 None MIR-196 AGGUAGU None None CM021923.1 61998803 61998861 - Gnathostomata Olfactores Unknown 1
Cfa-Mir-196-P4 cfa-mir-196a-2 MIR-196 AGGUAGU MIMAT0006662 None chr27 1270718 1270776 - Gnathostomata Olfactores No 1
Bta-Mir-196-P4 bta-mir-196a-2 MIR-196 AGGUAGU MIMAT0009255 None NC_037332.1 26040804 26040862 - Gnathostomata Olfactores No 1
Ami-Mir-196-P4 ami-mir-196-2 MIR-196 AGGUAGU MIMAT0038215 None NW_017708254.1 280066 280123 + Gnathostomata Olfactores Unknown 1
Aca-Mir-196-P4 aca-mir-196a-2 MIR-196 AGGUAGU MIMAT0021831 None 2 72077189 72077246 - Gnathostomata Olfactores No 1
Tni-Mir-196-P3a tni-mir-196b MIR-196 AGGUAGU MIMAT0003034 None Un_random 5576389 5576449 - Clupeocephala Olfactores No 1
Mal-Mir-196-P3a None MIR-196 AGGUAGU None None KV884780.1 181712 181773 + Clupeocephala Olfactores No 1
Dre-Mir-196-P3a dre-mir-196b MIR-196 AGGUAGU MIMAT0001860 None chr3 23673387 23673447 + Clupeocephala Olfactores No 1
Sto-Mir-196-P3 None MIR-196 AGGUAGU None None BFAA01000145.1 370520 370577 - Gnathostomata Olfactores Unknown 1
Spt-Mir-196-P3 None MIR-196 AGGUAGU None None QEPC01008679.1 1374373 1374431 - Gnathostomata Olfactores Unknown 1
Sha-Mir-196-P3 None MIR-196 AGGUAGU None None GL856828.1 1096256 1096315 - Gnathostomata Olfactores No 1
Rno-Mir-196-P3 rno-mir-196c MIR-196 AGGUAGU MIMAT0005303 MIMAT0017299 chr10 84113588 84113647 + Gnathostomata Olfactores No 1
Pbv-Mir-196-P3 pbv-mir-196a MIR-196 AGGUAGU MIMAT0038993 MIMAT0038994 KE954034.1 30623 30683 - Gnathostomata Olfactores Unknown 1
Pab-Mir-196-P3 None MIR-196 AGGUAGU None None CM054698.2 67427696 67427755 + Gnathostomata Olfactores Unknown 1
Ocu-Mir-196-P3 ocu-mir-196a-1 MIR-196 AGGUAGU MIMAT0048311 MIMAT0048312 chr19 38730720 38730779 + Gnathostomata Olfactores No 1
Neu-Mir-196-P3 None MIR-196 AGGUAGU None None CM051814.1 352392795 352392854 + Gnathostomata Olfactores No 1
Mmu-Mir-196-P3 mmu-mir-196a-1 MIR-196 AGGUAGU MIMAT0000518 MIMAT0017013 chr11 96265187 96265246 + Gnathostomata Olfactores No 1
Mmr-Mir-196-P3 None MIR-196 AGGUAGU None None CM007676.1 26366250 26366309 + Gnathostomata Olfactores Unknown 1
Mml-Mir-196-P3 mml-mir-196a-1 MIR-196 AGGUAGU MIMAT0002519 None CM014351.1 48163623 48163682 + Gnathostomata Olfactores No 1
Mdo-Mir-196-P3 mdo-mir-196a MIR-196 AGGUAGU MIMAT0028494 MIMAT0028495 2 201215985 201216044 - Gnathostomata Olfactores No 1
Loc-Mir-196-P3 None MIR-196 AGGUAGU None None LG15 9244730 9244790 - Gnathostomata Olfactores No 1
Lch-Mir-196-P3 None MIR-196 AGGUAGU None None JH126617.1 1196138 1196196 - Gnathostomata Olfactores Unknown 1
Laf-Mir-196-P3 None MIR-196 AGGUAGU None None GL010058.1 19714495 19714554 + Gnathostomata Olfactores Unknown 1
Hsa-Mir-196-P3 hsa-mir-196a-1 MIR-196 AGGUAGU MIMAT0000226 MIMAT0037307 chr17 48632494 48632553 - Gnathostomata Olfactores No 1
Gja-Mir-196-P3 None MIR-196 AGGUAGU None None NW_015168072.1 216886 216946 + Gnathostomata Olfactores Unknown 1
Gga-Mir-196-P3 gga-mir-196-1 MIR-196 AGGUAGU MIMAT0001121 MIMAT0031017 27 6183444 6183503 + Gnathostomata Olfactores No 1
Eca-Mir-196-P3 eca-mir-196a MIR-196 AGGUAGU MIMAT0013028 None CM009158.1 24755452 24755511 - Gnathostomata Olfactores No 1
Dno-Mir-196-P3 dno-mir-196c MIR-196 AGGUAGU MIMAT0047733 MIMAT0047734 JH566304 23130 23189 - Gnathostomata Olfactores No 1
Cpo-Mir-196-P3 cpo-mir-196a MIR-196 AGGUAGU MIMAT0047078 MIMAT0047079 scaffold_53 8623790 8623849 + Gnathostomata Olfactores No 1
Cpi-Mir-196-P3 cpi-mir-196-1 MIR-196 AGGUAGU MIMAT0037815 MIMAT0037816 JH584731 2484790 2484849 - Gnathostomata Olfactores No 1
Cmi-Mir-196-P3 None MIR-196 AGGUAGU None None KI635976.1 1249990 1250047 + Gnathostomata Olfactores No 1
Cli-Mir-196-P3 cli-mir-196-1 MIR-196 AGGUAGU MIMAT0038570 MIMAT0038571 scaffold265 1508615 1508674 + Gnathostomata Olfactores No 1
Cja-Mir-196-P3 None MIR-196 AGGUAGU None None CM021919.1 113729898 113729957 + Gnathostomata Olfactores Unknown 1
Cfa-Mir-196-P3 cfa-mir-196a-1 MIR-196 AGGUAGU MIMAT0006662 None chr9 24895683 24895742 - Gnathostomata Olfactores Unknown 1
Bta-Mir-196-P3 bta-mir-196a-1 MIR-196 AGGUAGU MIMAT0009255 None NC_037346.1 37860888 37860947 + Gnathostomata Olfactores No 1
Ami-Mir-196-P3 ami-mir-196-1 MIR-196 AGGUAGU MIMAT0038215 None NW_017708231.1 3471039 3471098 - Gnathostomata Olfactores Unknown 1
Aca-Mir-196-P3 aca-mir-196c MIR-196 AGGUAGU MIMAT0021832 MIMAT0021833 6 75666553 75666613 - Gnathostomata Olfactores No 1
Xla-Mir-196-P1f None MIR-196 AGGUAGU None None NC_030735.1 33756951 33757010 - X. laevis Olfactores No 1
Xla-Mir-196-P1e None MIR-196 AGGUAGU None None NC_030734.1 39652903 39652962 - X. laevis Olfactores No 1
Rno-Mir-196-P1d rno-mir-196b-2 MIR-196 AGGUAGU MIMAT0001082 MIMAT0017171 chr4 82199068 82199125 - R. norvegicus Olfactores No 1
Rno-Mir-196-P1c rno-mir-196b-1 MIR-196 AGGUAGU MIMAT0001082 MIMAT0017171 chr4 82284863 82284920 - R. norvegicus Olfactores No 1
Tni-Mir-196-P1b None MIR-196 AGGUAGU None None 8 6797449 6797506 + Clupeocephala Olfactores No 1
Mal-Mir-196-P1b None MIR-196 AGGUAGU None None KV884815.1 2846296 2846353 + Clupeocephala Olfactores No 1
Gmo-Mir-196-P1b None MIR-196 AGGUAGU None None contig689238 4120 4178 + Clupeocephala Olfactores Unknown 1
Dre-Mir-196-P1b dre-mir-196d MIR-196 AGGUAGU MIMAT0011313 None chr16 20913420 20913478 + Clupeocephala Olfactores No
Tni-Mir-196-P1a tni-mir-196a-2 MIR-196 AGGUAGU MIMAT0002956 None 21 3025758 3025815 + Clupeocephala Olfactores Unknown 1
Mal-Mir-196-P1a None MIR-196 AGGUAGU None None KV884831.1 1314516 1314573 - Clupeocephala Olfactores No 1
Gmo-Mir-196-P1a gmo-mir-196a MIR-196 AGGUAGU MIMAT0044146 None GeneScaffold_1730 83617 83675 - Clupeocephala Olfactores No 1
Dre-Mir-196-P1a dre-mir-196a-2 MIR-196 AGGUAGU MIMAT0001276 MIMAT0031983 chr19 19747629 19747686 + Clupeocephala Olfactores No 1
Xtr-Mir-196-P1 xtr-mir-196b MIR-196 AGGUAGU MIMAT0003691 None chr6 32896546 32896604 + Gnathostomata Olfactores Unknown 1
Tgu-Mir-196-P1 tgu-mir-196 MIR-196 AGGUAGU MIMAT0025394 None 2 33989168 33989226 - Gnathostomata Olfactores No 1
Sto-Mir-196-P1 None MIR-196 AGGUAGU None None BFAA01000097.1 1251099 1251156 - Gnathostomata Olfactores No 1
Spt-Mir-196-P1 None MIR-196 AGGUAGU None None QEPC01011191.1 2904310 2904370 - Gnathostomata Olfactores Unknown 1
Sha-Mir-196-P1 None MIR-196 AGGUAGU None None GL861706.1 2274380 2274438 + Gnathostomata Olfactores No 1
Pbv-Mir-196-P1 pbv-mir-196c MIR-196 AGGUAGU MIMAT0038995 None KE953980.1 281968 282028 + Gnathostomata Olfactores Unknown 1
Pab-Mir-196-P1 None MIR-196 AGGUAGU None None CM054685.2 57992166 57992223 + Gnathostomata Olfactores Unknown 1
Ocu-Mir-196-P1 ocu-mir-196b MIR-196 AGGUAGU MIMAT0048315 MIMAT0048316 chr10 11887975 11888032 - Gnathostomata Olfactores No 1
Oan-Mir-196-P1 oan-mir-196b MIR-196 AGGUAGU MIMAT0007139 MIMAT0007140 NC_041735.1 55167001 55167059 + Gnathostomata Olfactores Unknown 1
Neu-Mir-196-P1 None MIR-196 AGGUAGU None None CM051815.1 18216267 18216325 - Gnathostomata Olfactores Unknown 1
Mun-Mir-196-P1 None MIR-196 AGGUAGU None None LR594632.1 169050447 169050505 - Gnathostomata Olfactores Unknown 1
Mmu-Mir-196-P1 mmu-mir-196b MIR-196 AGGUAGU MIMAT0001081 MIMAT0017170 chr6 52230093 52230150 - Gnathostomata Olfactores No 1
Mmr-Mir-196-P1 mmr-mir-196b MIR-196 AGGUAGU MIMAT0049222 None CM007671.1 81176554 81176611 - Gnathostomata Olfactores No 1
Mml-Mir-196-P1 mml-mir-196b MIR-196 AGGUAGU MIMAT0006229 MIMAT0026840 CM014338.1 87935415 87935472 + Gnathostomata Olfactores No 1
Mdo-Mir-196-P1 mdo-mir-196b MIR-196 AGGUAGU MIMAT0004124 None 8 297346810 297346868 + Gnathostomata Olfactores Unknown 1
Loc-Mir-196-P1 None MIR-196 AGGUAGU None None LG11 41141719 41141777 - Gnathostomata Olfactores No 1
Lch-Mir-196-P1 None MIR-196 AGGUAGU None None JH126711.1 2060364 2060422 - Gnathostomata Olfactores Unknown 1
Laf-Mir-196-P1 None MIR-196 AGGUAGU None None GL010032.1 31300394 31300453 + Gnathostomata Olfactores Unknown 1
Hsa-Mir-196-P1 hsa-mir-196b MIR-196 AGGUAGU MIMAT0001080 MIMAT0009201 chr7 27169492 27169549 - Gnathostomata Olfactores No 1
Gja-Mir-196-P1 None MIR-196 AGGUAGU None None NW_015170898.1 1224278 1224340 - Gnathostomata Olfactores No 1
Gga-Mir-196-P1 gga-mir-196-2 MIR-196 AGGUAGU MIMAT0001121 MIMAT0026504 2 32649895 32649953 - Gnathostomata Olfactores No 1
Ete-Mir-196-P1 None MIR-196 AGGUAGU None None JH980305 55282907 55282964 - Gnathostomata Olfactores No 1
Eca-Mir-196-P1 eca-mir-196b MIR-196 AGGUAGU MIMAT0012939 None CM009151.1 58381210 58381267 - Gnathostomata Olfactores No 1
Dno-Mir-196-P1 dno-mir-196b MIR-196 AGGUAGU MIMAT0047731 MIMAT0047732 JH562181 5934 5991 - Gnathostomata Olfactores No 1
Cpo-Mir-196-P1 cpo-mir-196b MIR-196 AGGUAGU MIMAT0047082 MIMAT0047083 scaffold_44 3907441 3907498 - Gnathostomata Olfactores No 1
Cpi-Mir-196-P1 cpi-mir-196-3 MIR-196 AGGUAGU MIMAT0037815 None JH584682 644036 644094 - Gnathostomata Olfactores Unknown 1
Cmi-Mir-196-P1 None MIR-196 AGGUAGU None None KI635933.1 1104598 1104655 + Gnathostomata Olfactores No 1
Cli-Mir-196-P1 cli-mir-196-3 MIR-196 AGGUAGU MIMAT0038570 MIMAT0038572 scaffold699 1139790 1139848 - Gnathostomata Olfactores No 1
Cja-Mir-196-P1 None MIR-196 AGGUAGU None None CM021922.1 28233879 28233936 + Gnathostomata Olfactores Unknown 1
Cfa-Mir-196-P1 cfa-mir-196b MIR-196 AGGUAGU MIMAT0006620 None chr14 40344005 40344062 - Gnathostomata Olfactores No 1
Bta-Mir-196-P1 bta-mir-196b MIR-196 AGGUAGU MIMAT0009256 None NC_037331.1 68873169 68873226 + Gnathostomata Olfactores No 1
Ami-Mir-196-P1 ami-mir-196-3 MIR-196 AGGUAGU MIMAT0038215 None NW_017712875.1 24902813 24902871 - Gnathostomata Olfactores Unknown 1
Aca-Mir-196-P1 aca-mir-196a-1 MIR-196 AGGUAGU MIMAT0021831 None GL343275.1 1429558 1429620 + Gnathostomata Olfactores No 1
Pma-Mir-196-o3 None MIR-196 AGGUAGU None None NC_046124.1 733295 733353 - P. marinus Olfactores Unknown 1
Pma-Mir-196-o2 None MIR-196 AGGUAGU None None NC_046070.1 1095082 1095141 + P. marinus Olfactores Unknown 1
Pma-Mir-196-o1 pma-mir-196a MIR-196 AGGUAGU MIMAT0019502 MIMAT0019503 NC_046078.1 8134714 8134775 + P. marinus Olfactores No 1
Cin-Mir-196 cin-mir-196 MIR-196 AGGUAGU MIMAT0016413 MIMAT0016414 7 2713377 2713429 - Olfactores Olfactores Unknown 1

(red - mature/co-mature, blue - star)

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