MirGeneDB 3.0
MirGeneDB ID

Oan-Mir-196-P4

Family name MIR-196 (all species)
Species Platypus (Ornithorhynchus anatinus)
MiRBase ID oan-mir-196a
Paralogues Oan-Mir-196-P1 
Orthologues Aca-Mir-196-P4  Ami-Mir-196-P4  Bta-Mir-196-P4  Cfa-Mir-196-P4  Cin-Mir-196  Cja-Mir-196-P4  Cli-Mir-196-P4  Cmi-Mir-196-P4  Cpi-Mir-196-P4  Cpo-Mir-196-P4  Dno-Mir-196-P4  Dre-Mir-196-P4a  Dre-Mir-196-P4b  Eca-Mir-196-P4  Ete-Mir-196-P4  Gga-Mir-196-P4  Gja-Mir-196-P4  Gmo-Mir-196-P4a  Hsa-Mir-196-P4  Laf-Mir-196-P4  Lch-Mir-196-P4  Loc-Mir-196-P4  Mal-Mir-196-P4a  Mml-Mir-196-P4  Mmr-Mir-196-P4  Mmu-Mir-196-P4  Mun-Mir-196-P4  Neu-Mir-196-P4  Ocu-Mir-196-P4  Pab-Mir-196-P4  Rno-Mir-196-P4  Sha-Mir-196-P4  Spt-Mir-196-P4  Tgu-Mir-196-P4  Tni-Mir-196-P4a1  Tni-Mir-196-P4a2  Tni-Mir-196-P4a3  Xla-Mir-196-P4c-v1  Xla-Mir-196-P4d-v1  Xtr-Mir-196-P4 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Olfactores
Genome context
(mOrnAna1.p.v1_plustraces)		 NC_041737.1: 57674459-57674517 [+]
Seed AGGUAGU
Precursor
(pre-Mir +30nt flank)		 
UCGCCCGCCUCGCUCAGCUGGUCUGUGGCUUAGGUAGUUUCAUGUUGUUGGGAUUGAAUUUUGAACUCGGCAACAAGAAACUGUCUGAGUUACAUCAGUCGGUUUUCGUCGUGGGCCCC
Get precursor sequence
Structure
        10            20        30        40        50         
UCGCCCGCCUCGCUCAG----|   UC          GU      A          AUUGAA 
                     CUGG  UGUGGCUUAG  AGUUUC UGUUGUUGGG      \
                     GACU  ACAUUGAGUC  UCAAAG ACAACGGCUC      U
CCCCGGGUGCUGCUUUUGGCU^   --          UG      A          AAGUUU 
       110       100          90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
Br Ce He Ki Te
Mature sequence

Oan-Mir-196-P4_5p
mirBase accessionMIMAT0006876
Sequence 
0- UAGGUAGUUUCAUGUUGUUGGGA -23
Get sequence
Star sequence

Oan-Mir-196-P4_3p*
mirBase accessionMIMAT0006877
Sequence 
36- UCGGCAACAAGAAACUGUCUGAG -59
Get sequence