MirGeneDB 3.0
MirGeneDB ID

Mal-Mir-196-P1b

Family name MIR-196 (all species)
Species Asian swamp eel (Monopterus albus)
MiRBase ID
Paralogues Mal-Mir-196-P1a  Mal-Mir-196-P3a  Mal-Mir-196-P4a 
Orthologues Aca-Mir-196-P1  Ami-Mir-196-P1  Bta-Mir-196-P1  Cfa-Mir-196-P1  Cin-Mir-196  Cja-Mir-196-P1  Cli-Mir-196-P1  Cmi-Mir-196-P1  Cpi-Mir-196-P1  Cpo-Mir-196-P1  Dno-Mir-196-P1  Dre-Mir-196-P1b  Eca-Mir-196-P1  Ete-Mir-196-P1  Gga-Mir-196-P1  Gja-Mir-196-P1  Gmo-Mir-196-P1b  Hsa-Mir-196-P1  Laf-Mir-196-P1  Lch-Mir-196-P1  Loc-Mir-196-P1  Mdo-Mir-196-P1  Mml-Mir-196-P1  Mmr-Mir-196-P1  Mmu-Mir-196-P1  Mun-Mir-196-P1  Neu-Mir-196-P1  Oan-Mir-196-P1  Ocu-Mir-196-P1  Pab-Mir-196-P1  Pbv-Mir-196-P1  Pma-Mir-196-o1  Sha-Mir-196-P1  Spt-Mir-196-P1  Sto-Mir-196-P1  Tgu-Mir-196-P1  Tni-Mir-196-P1b  Xtr-Mir-196-P1 
Node of Origin (locus) Clupeocephala
Node of Origin (family) Olfactores
Genome context
(GCA_001952655.1_M_albus_1.0_genomic)		 KV884815.1: 2846296-2846353 [+] UCSC Ensembl
Seed AGGUAGU
Precursor
(pre-Mir +30nt flank)		 
CUGAAGAGGAGAGCGGGCUGUUGAGUGGUUUAGGUAGUCUCAUGUUGUUGGGCUUUAUUAUUUUUCCCACAACACGAAACUGCCUUGAUUACCUCAGUAAAACUCGUCGCAUCAUGAA
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Structure
        10        20          30        40        50        
CUGAAGAGGAGAGCGGGCUG-    -|     U       C  A      U   CUUUA 
                     UUGA GUGGUU AGGUAGU UC UGUUGU GGG     U
                     GACU CAUUAG UCCGUCA AG ACAACA CCU     U
AAGUACUACGCUGCUCAAAAU    C^     U       A  C      C   UUUUA 
      110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
Fe Fe In Ma Ma
Mature sequence

Mal-Mir-196-P1b_5p
mirBase accessionNone
Sequence 
0- UAGGUAGUCUCAUGUUGUUGGG -22
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Star sequence

Mal-Mir-196-P1b_3p*
mirBase accessionNone
Sequence 
36- CCACAACACGAAACUGCCUUGA -58
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