Mir
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DB
2.1
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73 microRNA genes with seed AUGGCAC
Sort by genome coordinates
Motifs
MirGeneDB ID
▼
MiRBase ID
Family
Seed
5p accession
3p accession
Chromosome
Start
End
Strand
Node of origin (locus)
Node of origin (family)
3' NTU
UG
UGUG
CNNC
Tgu-Mir-96-P3
tgu-mir-183
MIR-96
AUGGCAC
MIMAT0025393
None
gnl|ti|1263877921
384
445
-
Bilateria
Bilateria
No
1
1
Tca-Mir-96-P3
tca-mir-263a
MIR-96
AUGGCAC
MIMAT0010093
MIMAT0019180
LG5
13500413
13500472
-
Bilateria
Bilateria
No
1
Spu-Mir-96-P3
spu-mir-183
MIR-96
AUGGCAC
MIMAT0009684
None
AAGJ06000006.1
25936385
25936452
+
Bilateria
Bilateria
No
1
Spt-Mir-96-P3
None
MIR-96
AUGGCAC
None
None
QEPC01000343.1
788658
788719
-
Bilateria
Bilateria
Unknown
1
Sko-Mir-96-P3
sko-mir-183
MIR-96
AUGGCAC
MIMAT0009631
None
NW_003114962.1
34337
34398
+
Bilateria
Bilateria
Unknown
Pmi-Mir-96-P3
None
MIR-96
AUGGCAC
None
None
JH769268.1
98683
98749
+
Bilateria
Bilateria
No
1
1
Pfl-Mir-96-P3
None
MIR-96
AUGGCAC
None
None
LD345584.1
199276
199339
-
Bilateria
Bilateria
Unknown
1
1
Lgi-Mir-96-P3
lgi-mir-263b
MIR-96
AUGGCAC
MIMAT0009584
None
LOTGIsca_71
756862
756922
+
Bilateria
Bilateria
Unknown
1
1
Lch-Mir-96-P3
None
MIR-96
AUGGCAC
None
None
JH127218.1
516970
517031
-
Bilateria
Bilateria
Unknown
1
1
Lan-Mir-96-P3
None
MIR-96
AUGGCAC
None
None
LFEI01000342
92452
92511
-
Bilateria
Bilateria
Unknown
1
Isc-Mir-96-P3
isc-mir-263a
MIR-96
AUGGCAC
MIMAT0012692
None
DS633978
93562
93624
+
Bilateria
Bilateria
No
1
Hme-Mir-96-P3
hme-mir-263a
MIR-96
AUGGCAC
MIMAT0024949
None
HE672064
563354
563413
+
Bilateria
Bilateria
No
1
Dya-Mir-96-P3
dya-mir-263a
MIR-96
AUGGCAC
MIMAT0009114
None
2L
8374846
8374908
-
Bilateria
Bilateria
No
1
Dsi-Mir-96-P3
dsi-mir-263a
MIR-96
AUGGCAC
MIMAT0008851
None
2L
11585671
11585733
-
Bilateria
Bilateria
No
1
Dpu-Mir-96-P3
dpu-mir-263a
MIR-96
AUGGCAC
MIMAT0012649
None
DAPPUscaffold_87
475620
475711
+
Bilateria
Bilateria
No
1
1
Dmo-Mir-96-P3
dmo-mir-263a
MIR-96
AUGGCAC
MIMAT0008653
None
scaffold_6500
16780751
16780812
+
Bilateria
Bilateria
No
Dme-Mir-96-P3
dme-mir-263a
MIR-96
AUGGCAC
MIMAT0000319
MIMAT0020799
2L
11953424
11953486
-
Bilateria
Bilateria
No
1
Dma-Mir-96-P3
None
MIR-96
AUGGCAC
None
None
NC_046180.1
10114339
10114567
-
Bilateria
Bilateria
No
1
1
Dan-Mir-96-P3
dan-mir-263a
MIR-96
AUGGCAC
MIMAT0008443
None
scaffold_12943
2289727
2289789
+
Bilateria
Bilateria
No
1
Cin-Mir-96-P3
cin-mir-183
MIR-96
AUGGCAC
MIMAT0006107
MIMAT0015262
HT000094.1
543640
543692
-
Bilateria
Bilateria
No
1
1
Cgi-Mir-96-P3
None
MIR-96
AUGGCAC
None
None
scaffold626
18351
18408
+
Bilateria
Bilateria
No
1
Cel-Mir-96-P3
cel-mir-228
MIR-96
AUGGCAC
MIMAT0000283
MIMAT0020327
chrIV
5562040
5562103
+
Bilateria
Bilateria
No
Cbr-Mir-96-P3
cbr-mir-228
MIR-96
AUGGCAC
MIMAT0000495
None
IV
6041106
6041167
+
Bilateria
Bilateria
No
Bpl-Mir-96-P3
None
MIR-96
AUGGCAC
None
None
QEOQ01000331.1
32991
33060
+
Bilateria
Bilateria
Unknown
1
Bla-Mir-96-P3
None
MIR-96
AUGGCAC
None
None
Sc0000043
398484
398542
-
Bilateria
Bilateria
No
Bge-Mir-96-P3
None
MIR-96
AUGGCAC
None
None
KZ614838.1
267225
267283
-
Bilateria
Bilateria
No
1
Bfl-Mir-96-P3
bfl-mir-183
MIR-96
AUGGCAC
MIMAT0009487
None
NC_049983.1
18504837
18504895
+
Bilateria
Bilateria
No
Asu-Mir-96-P3
asu-mir-228
MIR-96
AUGGCAC
MIMAT0021503
MIMAT0021504
Scaffold583
166177
166237
-
Bilateria
Bilateria
No
Aae-Mir-96-P3
aae-mir-263a
MIR-96
AUGGCAC
MIMAT0014289
MIMAT0015372
supercont1.981
164960
165021
-
Bilateria
Bilateria
No
1
Xtr-Mir-96-P3-v1
xtr-mir-183
MIR-96
AUGGCAC
MIMAT0003612
None
chr3
77399664
77399725
+
Bilateria
Bilateria
No
1
1
Sto-Mir-96-P3-v1
None
MIR-96
AUGGCAC
None
None
BFAA01006258.1
22496
22557
-
Bilateria
Bilateria
No
1
Sha-Mir-96-P3-v1
None
MIR-96
AUGGCAC
None
None
GL861654.1
986809
986870
-
Bilateria
Bilateria
No
1
1
Rno-Mir-96-P3-v1
rno-mir-183
MIR-96
AUGGCAC
MIMAT0000860
MIMAT0017141
chr4
57463591
57463652
-
Bilateria
Bilateria
No
1
1
Pbv-Mir-96-P3-v1
pbv-mir-183
MIR-96
AUGGCAC
MIMAT0038982
None
KE958924.1
50061
50122
-
Bilateria
Bilateria
Unknown
1
Ocu-Mir-96-P3-v1
ocu-mir-183
MIR-96
AUGGCAC
MIMAT0048287
MIMAT0048288
chr7
14826894
14826955
+
Bilateria
Bilateria
No
1
1
Oan-Mir-96-P3-v1
oan-mir-183
MIR-96
AUGGCAC
MIMAT0006805
None
NC_041737.1
47132912
47132973
-
Bilateria
Bilateria
Unknown
1
1
Mun-Mir-96-P3-v1
None
MIR-96
AUGGCAC
None
None
96-P3-v1_LR594641.1:18222814-18223075
101
162
+
Bilateria
Bilateria
Unknown
1
Mmu-Mir-96-P3-v1
mmu-mir-183
MIR-96
AUGGCAC
MIMAT0000212
MIMAT0004539
chr6
30169671
30169732
-
Bilateria
Bilateria
No
1
1
Mml-Mir-96-P3-v1
mml-mir-183
MIR-96
AUGGCAC
MIMAT0002783
MIMAT0026603
chr3
155860352
155860413
-
Bilateria
Bilateria
No
1
1
Mdo-Mir-96-P3-v1
mdo-mir-183
MIR-96
AUGGCAC
MIMAT0004146
MIMAT0026691
8
189668277
189668338
-
Bilateria
Bilateria
No
1
1
Loc-Mir-96-P3-v1
None
MIR-96
AUGGCAC
None
None
LG8
20420183
20420244
-
Bilateria
Bilateria
Unknown
1
1
Hsa-Mir-96-P3-v1
hsa-mir-183
MIR-96
AUGGCAC
MIMAT0000261
MIMAT0004560
chr7
129774927
129774988
-
Bilateria
Bilateria
No
1
1
Gja-Mir-96-P3-v1
None
MIR-96
AUGGCAC
None
None
NW_015171061.1
25415
25476
+
Bilateria
Bilateria
Unknown
1
Gga-Mir-96-P3-v1
gga-mir-183
MIR-96
AUGGCAC
MIMAT0001191
None
1
1479855
1479916
-
Bilateria
Bilateria
No
1
1
Ete-Mir-96-P3-v1
None
MIR-96
AUGGCAC
None
None
JH980321
22675320
22675381
-
Bilateria
Bilateria
No
1
1
Dno-Mir-96-P3-v1
dno-mir-183
MIR-96
AUGGCAC
MIMAT0047701
MIMAT0047702
JH568910
1129147
1129208
-
Bilateria
Bilateria
No
1
1
Cpo-Mir-96-P3-v1
cpo-mir-183
MIR-96
AUGGCAC
MIMAT0047050
MIMAT0047051
scaffold_11
50142394
50142455
-
Bilateria
Bilateria
No
1
1
Cpi-Mir-96-P3-v1
cpi-mir-183
MIR-96
AUGGCAC
MIMAT0037800
None
JH584440
1633083
1633144
+
Bilateria
Bilateria
Unknown
1
1
Cmi-Mir-96-P3-v1
None
MIR-96
AUGGCAC
None
None
KI635871.1
2243506
2243567
+
Bilateria
Bilateria
No
1
Cli-Mir-96-P3-v1
cli-mir-183
MIR-96
AUGGCAC
MIMAT0038558
MIMAT0038559
scaffold121
1261591
1261652
+
Bilateria
Bilateria
No
1
1
Cfa-Mir-96-P3-v1
cfa-mir-183
MIR-96
AUGGCAC
MIMAT0006621
None
chr14
7068542
7068603
+
Bilateria
Bilateria
Yes
1
1
Bta-Mir-96-P3-v1
bta-mir-183
MIR-96
AUGGCAC
MIMAT0009245
None
NC_037331.1
93596161
93596222
-
Bilateria
Bilateria
No
1
1
Ami-Mir-96-P3-v1
ami-mir-183
MIR-96
AUGGCAC
MIMAT0038196
MIMAT0038197
NW_017709854.1
28193883
28193944
+
Bilateria
Bilateria
No
1
1
Tni-Mir-96-P3a
tni-mir-183
MIR-96
AUGGCAC
MIMAT0003090
None
19
3385640
3385701
-
Clupeocephala
Bilateria
Unknown
1
1
Mal-Mir-96-P3a-v1
None
MIR-96
AUGGCAC
None
None
KV884729.1
3066306
3066367
-
Clupeocephala
Bilateria
No
1
1
Gmo-Mir-96-P3a-v1
gmo-mir-183
MIR-96
AUGGCAC
MIMAT0044261
MIMAT0044262
GeneScaffold_4098
12669
12730
+
Clupeocephala
Bilateria
No
1
1
Dre-Mir-96-P3a-v1
dre-mir-183
MIR-96
AUGGCAC
MIMAT0001273
MIMAT0031921
chr4
15074581
15074642
+
Clupeocephala
Bilateria
Yes
1
1
Tni-Mir-96-P3b
None
MIR-96
AUGGCAC
None
None
13
5040154
5040215
-
Clupeocephala
Bilateria
Unknown
1
Mal-Mir-96-P3b-v1
None
MIR-96
AUGGCAC
None
None
KV884693.1
180999
181060
+
Clupeocephala
Bilateria
No
1
Xla-Mir-96-P3c-v1
None
MIR-96
AUGGCAC
None
None
NC_030728.1
77405965
77406026
+
X. laevis
Bilateria
No
1
1
Xla-Mir-96-P3d-v1
xla-mir-183
MIR-96
AUGGCAC
MIMAT0046493
MIMAT0046494
NC_030729.1
63429415
63429476
-
X. laevis
Bilateria
No
1
1
Ebu-Mir-96-P3e
None
MIR-96
AUGGCAC
None
None
FYBX02009823.1
3458408
3458467
-
E. burgeri
Bilateria
Unknown
1
Ebu-Mir-96-P3f
None
MIR-96
AUGGCAC
None
None
FYBX02009661.1
1101010
1101067
-
E. burgeri
Bilateria
Unknown
1
Pma-Mir-96-P3o1
pma-mir-183
MIR-96
AUGGCAC
MIMAT0019491
MIMAT0019492
NC_046104.1
2254548
2254609
-
P. marinus
Bilateria
Unknown
1
1
Pma-Mir-96-P3o2
None
MIR-96
AUGGCAC
None
None
NC_046114.1
7244256
7244315
+
P. marinus
Bilateria
Unknown
1
Lpo-Mir-96-P3r
None
MIR-96
AUGGCAC
None
None
NW_013665929.1
544290
544349
-
L. polyphemus
Bilateria
Unknown
1
Lpo-Mir-96-P3s
None
MIR-96
AUGGCAC
None
None
NW_013666424.1
50875
50934
+
L. polyphemus
Bilateria
Unknown
Lpo-Mir-96-P3t
None
MIR-96
AUGGCAC
None
None
NW_013665634.1
1441897
1441956
+
L. polyphemus
Bilateria
Unknown
1
1
Lpo-Mir-96-P3u
None
MIR-96
AUGGCAC
None
None
NW_013665647.1
250244
250303
-
L. polyphemus
Bilateria
Unknown
1
1
Lpo-Mir-96-P3v
None
MIR-96
AUGGCAC
None
None
NW_013665621.1
1346537
1346596
-
L. polyphemus
Bilateria
Unknown
1
Csc-Mir-96-P3w
None
MIR-96
AUGGCAC
None
None
NW_019385290.1
223516
223575
+
C. sculpturatus
Bilateria
Unknown
1
Csc-Mir-96-P3x
None
MIR-96
AUGGCAC
None
None
NW_019385963.1
35887
35949
-
C. sculpturatus
Bilateria
Unknown
1
Cpo-Mir-506-P2c
cpo-mir-507c
MIR-506
AUGGCAC
MIMAT0047319
MIMAT0047320
scaffold_84
2771646
2771702
+
C. porcellus
Eutheria
No
1
1
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