MirGeneDB 3.0
MirGeneDB ID

Csc-Mir-96-P3x

Family name MIR-96 (all species)
Species Arizona bark scorpion (Centruroides sculpturatus)
MiRBase ID
Paralogues Csc-Mir-96-P1w  Csc-Mir-96-P1x  Csc-Mir-96-P2w  Csc-Mir-96-P3w 
Orthologues Aae-Mir-96-P3  Aga-Mir-96-P3  Agr-Mir-96-P3  Ami-Mir-96-P3-v1  Asu-Mir-96-P3  Bfl-Mir-96-P3  Bge-Mir-96-P3  Bko-Mir-96-P3  Bla-Mir-96-P3  Bpl-Mir-96-P3  Bta-Mir-96-P3-v1  Cbr-Mir-96-P3  Cel-Mir-96-P3  Cfa-Mir-96-P3-v1  Cin-Mir-96-P3  Cja-Mir-96-P3-v1  Cli-Mir-96-P3-v1  Cmi-Mir-96-P3-v1  Cpi-Mir-96-P3-v1  Cpo-Mir-96-P3-v1  Cte-Mir-96-P3  Dan-Mir-96-P3  Dgr-Mir-96-P3  Dlo-Mir-96-P3  Dma-Mir-96-P3  Dme-Mir-96-P3  Dmo-Mir-96-P3  Dno-Mir-96-P3-v1  Dpu-Mir-96-P3  Dsi-Mir-96-P3  Dya-Mir-96-P3  Eba-Mir-96-P3  Eca-Mir-96-P3-v1  Egr-Mir-96-P3  Ete-Mir-96-P3-v1  Gga-Mir-96-P3-v1  Gja-Mir-96-P3-v1  Gpa-Mir-96-P3  Gsp-Mir-96-P3  Hme-Mir-96-P3  Hru-Mir-96-P3  Hsa-Mir-96-P3-v1  Isc-Mir-96-P3  Lan-Mir-96-P3  Lch-Mir-96-P3  Lgi-Mir-96-P3  Lhy-Mir-96-P3  Llo-Mir-96-P3  Loc-Mir-96-P3-v1  Mdo-Mir-96-P3-v1  Mgi-Mir-96-P3  Mml-Mir-96-P3-v1  Mmr-Mir-96-P3-v1  Mmu-Mir-96-P3-v1  Mom-Mir-96-P3  Mun-Mir-96-P3-v1  Neu-Mir-96-P3-v1  Oan-Mir-96-P3-v1  Ocu-Mir-96-P3-v1  Ofu-Mir-96-P3  Pab-Mir-96-P3-v1  Pbv-Mir-96-P3-v1  Pca-Mir-96-P3  Pcr-Mir-96-P3  Pdu-Mir-96-P3  Pfl-Mir-96-P3  Pmi-Mir-96-P3  Pve-Mir-96-P3  Rno-Mir-96-P3-v1  Rph-Mir-96-P3  Sha-Mir-96-P3-v1  Sko-Mir-96-P3  Snu-Mir-96-P3  Spt-Mir-96-P3  Spu-Mir-96-P3  Sro-Mir-96-P3  Sto-Mir-96-P3-v1  Tca-Mir-96-P3  Tgu-Mir-96-P3  Tur-Mir-96-P3  War-Mir-96-P3  Xtr-Mir-96-P3-v1 
Node of Origin (locus) C. sculpturatus
Node of Origin (family) Bilateria
Genome context
(GCF_000671375.1_CSC)		 NW_019385963.1: 35887-35949 [-] Ensembl
Clustered miRNAs
(< 50kb from Mir-96-P3x)		 Mir-96-P1x NW_019385963.1: 35587-35647 [-] Ensembl
Mir-96-P3x NW_019385963.1: 35887-35949 [-] Ensembl
Seed AUGGCAC
Precursor
(pre-Mir +30nt flank)		 
AAGAAUUUCAACAUAGGGUCUUUAAUUCUCAAUGGCACUGGAAGAAUUCACGGCGAGUAAUACUUGAUGCCGUGAUUUCUCUAGUGCUGUAGAGGAAGAGGGACUAAGAGCAACUUAGAACUU
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Structure
        10          20        30        40        50        60 
AAGAAUUUCAACAUAGG--|     AA     A           A   U      CGAGUAA 
                   GUCUUU  UUCUC AUGGCACUGGA GAA UCACGG       U
                   CAGGGA  AGGAG UGUCGUGAUCU CUU AGUGCC       A
UUCAAGAUUCAACGAGAAU^     GA     A           -   U      GUAGUUC 
 120       110       100        90        80         70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
Fe Fe Fe Fe Ma Ma Ma
Mature sequence

Csc-Mir-96-P3x_5p
mirBase accessionNone
Sequence 
0- AAUGGCACUGGAAGAAUUCACGG -23
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Star sequence

Csc-Mir-96-P3x_3p*
mirBase accessionNone
Sequence 
41- GUGAUUUCUCUAGUGCUGUAGA -63
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