Mir
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DB
2.1
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73 microRNA genes with seed AUGGCAC
Sort by genome coordinates
Motifs
MirGeneDB ID
MiRBase ID
Family
Seed
5p accession
3p accession
Chromosome
Start
End
Strand
Node of origin (locus)
Node of origin (family)
3' NTU
UG
▲
UGUG
CNNC
Tgu-Mir-96-P3
tgu-mir-183
MIR-96
AUGGCAC
MIMAT0025393
None
gnl|ti|1263877921
384
445
-
Bilateria
Bilateria
No
1
1
Dmo-Mir-96-P3
dmo-mir-263a
MIR-96
AUGGCAC
MIMAT0008653
None
scaffold_6500
16780751
16780812
+
Bilateria
Bilateria
No
Cgi-Mir-96-P3
None
MIR-96
AUGGCAC
None
None
scaffold626
18351
18408
+
Bilateria
Bilateria
No
1
Aae-Mir-96-P3
aae-mir-263a
MIR-96
AUGGCAC
MIMAT0014289
MIMAT0015372
supercont1.981
164960
165021
-
Bilateria
Bilateria
No
1
Hme-Mir-96-P3
hme-mir-263a
MIR-96
AUGGCAC
MIMAT0024949
None
HE672064
563354
563413
+
Bilateria
Bilateria
No
1
Tca-Mir-96-P3
tca-mir-263a
MIR-96
AUGGCAC
MIMAT0010093
MIMAT0019180
LG5
13500413
13500472
-
Bilateria
Bilateria
No
1
Bge-Mir-96-P3
None
MIR-96
AUGGCAC
None
None
KZ614838.1
267225
267283
-
Bilateria
Bilateria
No
1
Bfl-Mir-96-P3
bfl-mir-183
MIR-96
AUGGCAC
MIMAT0009487
None
NC_049983.1
18504837
18504895
+
Bilateria
Bilateria
No
Lan-Mir-96-P3
None
MIR-96
AUGGCAC
None
None
LFEI01000342
92452
92511
-
Bilateria
Bilateria
Unknown
1
Spt-Mir-96-P3
None
MIR-96
AUGGCAC
None
None
QEPC01000343.1
788658
788719
-
Bilateria
Bilateria
Unknown
1
Bla-Mir-96-P3
None
MIR-96
AUGGCAC
None
None
Sc0000043
398484
398542
-
Bilateria
Bilateria
No
Sko-Mir-96-P3
sko-mir-183
MIR-96
AUGGCAC
MIMAT0009631
None
NW_003114962.1
34337
34398
+
Bilateria
Bilateria
Unknown
Isc-Mir-96-P3
isc-mir-263a
MIR-96
AUGGCAC
MIMAT0012692
None
DS633978
93562
93624
+
Bilateria
Bilateria
No
1
Bpl-Mir-96-P3
None
MIR-96
AUGGCAC
None
None
QEOQ01000331.1
32991
33060
+
Bilateria
Bilateria
Unknown
1
Spu-Mir-96-P3
spu-mir-183
MIR-96
AUGGCAC
MIMAT0009684
None
AAGJ06000006.1
25936385
25936452
+
Bilateria
Bilateria
No
1
Lch-Mir-96-P3
None
MIR-96
AUGGCAC
None
None
JH127218.1
516970
517031
-
Bilateria
Bilateria
Unknown
1
1
Cel-Mir-96-P3
cel-mir-228
MIR-96
AUGGCAC
MIMAT0000283
MIMAT0020327
chrIV
5562040
5562103
+
Bilateria
Bilateria
No
Cbr-Mir-96-P3
cbr-mir-228
MIR-96
AUGGCAC
MIMAT0000495
None
IV
6041106
6041167
+
Bilateria
Bilateria
No
Dme-Mir-96-P3
dme-mir-263a
MIR-96
AUGGCAC
MIMAT0000319
MIMAT0020799
2L
11953424
11953486
-
Bilateria
Bilateria
No
1
Asu-Mir-96-P3
asu-mir-228
MIR-96
AUGGCAC
MIMAT0021503
MIMAT0021504
Scaffold583
166177
166237
-
Bilateria
Bilateria
No
Dsi-Mir-96-P3
dsi-mir-263a
MIR-96
AUGGCAC
MIMAT0008851
None
2L
11585671
11585733
-
Bilateria
Bilateria
No
1
Dya-Mir-96-P3
dya-mir-263a
MIR-96
AUGGCAC
MIMAT0009114
None
2L
8374846
8374908
-
Bilateria
Bilateria
No
1
Dan-Mir-96-P3
dan-mir-263a
MIR-96
AUGGCAC
MIMAT0008443
None
scaffold_12943
2289727
2289789
+
Bilateria
Bilateria
No
1
Lgi-Mir-96-P3
lgi-mir-263b
MIR-96
AUGGCAC
MIMAT0009584
None
LOTGIsca_71
756862
756922
+
Bilateria
Bilateria
Unknown
1
1
Csc-Mir-96-P3x
None
MIR-96
AUGGCAC
None
None
NW_019385963.1
35887
35949
-
C. sculpturatus
Bilateria
Unknown
1
Tni-Mir-96-P3a
tni-mir-183
MIR-96
AUGGCAC
MIMAT0003090
None
19
3385640
3385701
-
Clupeocephala
Bilateria
Unknown
1
1
Ebu-Mir-96-P3e
None
MIR-96
AUGGCAC
None
None
FYBX02009823.1
3458408
3458467
-
E. burgeri
Bilateria
Unknown
1
Tni-Mir-96-P3b
None
MIR-96
AUGGCAC
None
None
13
5040154
5040215
-
Clupeocephala
Bilateria
Unknown
1
Ebu-Mir-96-P3f
None
MIR-96
AUGGCAC
None
None
FYBX02009661.1
1101010
1101067
-
E. burgeri
Bilateria
Unknown
1
Lpo-Mir-96-P3r
None
MIR-96
AUGGCAC
None
None
NW_013665929.1
544290
544349
-
L. polyphemus
Bilateria
Unknown
1
Lpo-Mir-96-P3v
None
MIR-96
AUGGCAC
None
None
NW_013665621.1
1346537
1346596
-
L. polyphemus
Bilateria
Unknown
1
Cpo-Mir-506-P2c
cpo-mir-507c
MIR-506
AUGGCAC
MIMAT0047319
MIMAT0047320
scaffold_84
2771646
2771702
+
C. porcellus
Eutheria
No
1
1
Lpo-Mir-96-P3s
None
MIR-96
AUGGCAC
None
None
NW_013666424.1
50875
50934
+
L. polyphemus
Bilateria
Unknown
Csc-Mir-96-P3w
None
MIR-96
AUGGCAC
None
None
NW_019385290.1
223516
223575
+
C. sculpturatus
Bilateria
Unknown
1
Pma-Mir-96-P3o2
None
MIR-96
AUGGCAC
None
None
NC_046114.1
7244256
7244315
+
P. marinus
Bilateria
Unknown
1
Sto-Mir-96-P3-v1
None
MIR-96
AUGGCAC
None
None
BFAA01006258.1
22496
22557
-
Bilateria
Bilateria
No
1
Hsa-Mir-96-P3-v1
hsa-mir-183
MIR-96
AUGGCAC
MIMAT0000261
MIMAT0004560
chr7
129774927
129774988
-
Bilateria
Bilateria
No
1
1
Ami-Mir-96-P3-v1
ami-mir-183
MIR-96
AUGGCAC
MIMAT0038196
MIMAT0038197
NW_017709854.1
28193883
28193944
+
Bilateria
Bilateria
No
1
1
Cmi-Mir-96-P3-v1
None
MIR-96
AUGGCAC
None
None
KI635871.1
2243506
2243567
+
Bilateria
Bilateria
No
1
Mml-Mir-96-P3-v1
mml-mir-183
MIR-96
AUGGCAC
MIMAT0002783
MIMAT0026603
chr3
155860352
155860413
-
Bilateria
Bilateria
No
1
1
Cpi-Mir-96-P3-v1
cpi-mir-183
MIR-96
AUGGCAC
MIMAT0037800
None
JH584440
1633083
1633144
+
Bilateria
Bilateria
Unknown
1
1
Mmu-Mir-96-P3-v1
mmu-mir-183
MIR-96
AUGGCAC
MIMAT0000212
MIMAT0004539
chr6
30169671
30169732
-
Bilateria
Bilateria
No
1
1
Rno-Mir-96-P3-v1
rno-mir-183
MIR-96
AUGGCAC
MIMAT0000860
MIMAT0017141
chr4
57463591
57463652
-
Bilateria
Bilateria
No
1
1
Pbv-Mir-96-P3-v1
pbv-mir-183
MIR-96
AUGGCAC
MIMAT0038982
None
KE958924.1
50061
50122
-
Bilateria
Bilateria
Unknown
1
Cpo-Mir-96-P3-v1
cpo-mir-183
MIR-96
AUGGCAC
MIMAT0047050
MIMAT0047051
scaffold_11
50142394
50142455
-
Bilateria
Bilateria
No
1
1
Gja-Mir-96-P3-v1
None
MIR-96
AUGGCAC
None
None
NW_015171061.1
25415
25476
+
Bilateria
Bilateria
Unknown
1
Ocu-Mir-96-P3-v1
ocu-mir-183
MIR-96
AUGGCAC
MIMAT0048287
MIMAT0048288
chr7
14826894
14826955
+
Bilateria
Bilateria
No
1
1
Cfa-Mir-96-P3-v1
cfa-mir-183
MIR-96
AUGGCAC
MIMAT0006621
None
chr14
7068542
7068603
+
Bilateria
Bilateria
Yes
1
1
Bta-Mir-96-P3-v1
bta-mir-183
MIR-96
AUGGCAC
MIMAT0009245
None
NC_037331.1
93596161
93596222
-
Bilateria
Bilateria
No
1
1
Xtr-Mir-96-P3-v1
xtr-mir-183
MIR-96
AUGGCAC
MIMAT0003612
None
chr3
77399664
77399725
+
Bilateria
Bilateria
No
1
1
Dno-Mir-96-P3-v1
dno-mir-183
MIR-96
AUGGCAC
MIMAT0047701
MIMAT0047702
JH568910
1129147
1129208
-
Bilateria
Bilateria
No
1
1
Mun-Mir-96-P3-v1
None
MIR-96
AUGGCAC
None
None
96-P3-v1_LR594641.1:18222814-18223075
101
162
+
Bilateria
Bilateria
Unknown
1
Ete-Mir-96-P3-v1
None
MIR-96
AUGGCAC
None
None
JH980321
22675320
22675381
-
Bilateria
Bilateria
No
1
1
Sha-Mir-96-P3-v1
None
MIR-96
AUGGCAC
None
None
GL861654.1
986809
986870
-
Bilateria
Bilateria
No
1
1
Mdo-Mir-96-P3-v1
mdo-mir-183
MIR-96
AUGGCAC
MIMAT0004146
MIMAT0026691
8
189668277
189668338
-
Bilateria
Bilateria
No
1
1
Oan-Mir-96-P3-v1
oan-mir-183
MIR-96
AUGGCAC
MIMAT0006805
None
NC_041737.1
47132912
47132973
-
Bilateria
Bilateria
Unknown
1
1
Gga-Mir-96-P3-v1
gga-mir-183
MIR-96
AUGGCAC
MIMAT0001191
None
1
1479855
1479916
-
Bilateria
Bilateria
No
1
1
Cli-Mir-96-P3-v1
cli-mir-183
MIR-96
AUGGCAC
MIMAT0038558
MIMAT0038559
scaffold121
1261591
1261652
+
Bilateria
Bilateria
No
1
1
Loc-Mir-96-P3-v1
None
MIR-96
AUGGCAC
None
None
LG8
20420183
20420244
-
Bilateria
Bilateria
Unknown
1
1
Xla-Mir-96-P3d-v1
xla-mir-183
MIR-96
AUGGCAC
MIMAT0046493
MIMAT0046494
NC_030729.1
63429415
63429476
-
X. laevis
Bilateria
No
1
1
Gmo-Mir-96-P3a-v1
gmo-mir-183
MIR-96
AUGGCAC
MIMAT0044261
MIMAT0044262
GeneScaffold_4098
12669
12730
+
Clupeocephala
Bilateria
No
1
1
Mal-Mir-96-P3a-v1
None
MIR-96
AUGGCAC
None
None
KV884729.1
3066306
3066367
-
Clupeocephala
Bilateria
No
1
1
Dre-Mir-96-P3a-v1
dre-mir-183
MIR-96
AUGGCAC
MIMAT0001273
MIMAT0031921
chr4
15074581
15074642
+
Clupeocephala
Bilateria
Yes
1
1
Mal-Mir-96-P3b-v1
None
MIR-96
AUGGCAC
None
None
KV884693.1
180999
181060
+
Clupeocephala
Bilateria
No
1
Xla-Mir-96-P3c-v1
None
MIR-96
AUGGCAC
None
None
NC_030728.1
77405965
77406026
+
X. laevis
Bilateria
No
1
1
Cin-Mir-96-P3
cin-mir-183
MIR-96
AUGGCAC
MIMAT0006107
MIMAT0015262
HT000094.1
543640
543692
-
Bilateria
Bilateria
No
1
1
Dpu-Mir-96-P3
dpu-mir-263a
MIR-96
AUGGCAC
MIMAT0012649
None
DAPPUscaffold_87
475620
475711
+
Bilateria
Bilateria
No
1
1
Dma-Mir-96-P3
None
MIR-96
AUGGCAC
None
None
NC_046180.1
10114339
10114567
-
Bilateria
Bilateria
No
1
1
Pfl-Mir-96-P3
None
MIR-96
AUGGCAC
None
None
LD345584.1
199276
199339
-
Bilateria
Bilateria
Unknown
1
1
Pmi-Mir-96-P3
None
MIR-96
AUGGCAC
None
None
JH769268.1
98683
98749
+
Bilateria
Bilateria
No
1
1
Lpo-Mir-96-P3t
None
MIR-96
AUGGCAC
None
None
NW_013665634.1
1441897
1441956
+
L. polyphemus
Bilateria
Unknown
1
1
Lpo-Mir-96-P3u
None
MIR-96
AUGGCAC
None
None
NW_013665647.1
250244
250303
-
L. polyphemus
Bilateria
Unknown
1
1
Pma-Mir-96-P3o1
pma-mir-183
MIR-96
AUGGCAC
MIMAT0019491
MIMAT0019492
NC_046104.1
2254548
2254609
-
P. marinus
Bilateria
Unknown
1
1
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