MirGeneDB 3.0
109 microRNA genes with seed UGAGCAA
Sort by genome coordinates Motifs
MirGeneDB ID ▼ MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) Iso­miR 3' NTU  UG  UGUG CNNC
Csc-Mir-87-P2l None MIR-87 UGAGCAA None None NW_019384506.1 706960 707019 + C. sculpturatus Protostomia No 1
Csc-Mir-87-P2k None MIR-87 UGAGCAA None None NW_019384773.1 171965 172023 - C. sculpturatus Protostomia No
Lpo-Mir-87-P2j None MIR-87 UGAGCAA None None NW_013802694.1 1353 1412 + L. polyphemus Protostomia No 1
Lpo-Mir-87-P2i None MIR-87 UGAGCAA None None NW_013674525.1 7075 7135 - L. polyphemus Protostomia No
Lpo-Mir-87-P2h None MIR-87 UGAGCAA None None NW_013667735.1 133581 133641 + L. polyphemus Protostomia No
Lpo-Mir-87-P2g None MIR-87 UGAGCAA None None NW_013665613.1 1476334 1476392 - L. polyphemus Protostomia No 1
Lpo-Mir-87-P2f None MIR-87 UGAGCAA None None NW_013665665.1 443855 443913 - L. polyphemus Protostomia No 1
Lpo-Mir-87-P2e None MIR-87 UGAGCAA None None NW_013665700.1 1213267 1213325 + L. polyphemus Protostomia No 1
Lpo-Mir-87-P2d None MIR-87 UGAGCAA None None NW_013665817.1 452773 452833 + L. polyphemus Protostomia No 1
Lpo-Mir-87-P2c None MIR-87 UGAGCAA None None NW_013666175.1 463869 463927 + L. polyphemus Protostomia No 1
Bge-Mir-87-P2b None MIR-87 UGAGCAA None None KZ615904.1 366017 366074 - B. germanica Protostomia No
Bge-Mir-87-P2a None MIR-87 UGAGCAA None None KZ618078.1 8798 8855 - B. germanica Protostomia No
Gpa-Mir-87-P2 V None MIR-87 UGAGCAA None None Scaffold60 202315 202381 + Protostomia Protostomia 2 No 1
Dya-Mir-87-P2 V dya-mir-87 MIR-87 UGAGCAA None MIMAT0009053 2L 12640997 12641068 - Protostomia Protostomia 2 No 1
Dsi-Mir-87-P2 V dsi-mir-87 MIR-87 UGAGCAA None MIMAT0008844 2L 9648332 9648403 - Protostomia Protostomia 2 No 1
Dmo-Mir-87-P2 V dmo-mir-87 MIR-87 UGAGCAA None MIMAT0008662 scaffold_6500 14729884 14729956 - Protostomia Protostomia 2 No 1
Dme-Mir-87-P2 V dme-mir-87 MIR-87 UGAGCAA MIMAT0020821 MIMAT0000361 2L 9950433 9950504 - Protostomia Protostomia 2 No 1
Dan-Mir-87-P2 V dan-mir-87 MIR-87 UGAGCAA None MIMAT0008411 scaffold_12916 13789788 13789859 - Protostomia Protostomia 2 No 1
Tca-Mir-87-P2 tca-mir-87b MIR-87 UGAGCAA MIMAT0018768 MIMAT0018769 LG6 1502215 1502272 + Protostomia Protostomia No 1 1
Snu-Mir-87-P2 None MIR-87 UGAGCAA None None CM049318.1 65882627 65882686 + Protostomia Protostomia No 1
Pve-Mir-87-P2 None MIR-87 UGAGCAA None None Pve_Chr1 171018507 171018565 - Protostomia Protostomia No 1
Pau-Mir-87-P2 None MIR-87 UGAGCAA None None NMRA01000440.1 155778 155836 - Protostomia Protostomia No 1
Ofu-Mir-87-P2 None MIR-87 UGAGCAA None None CAIIXF020000007.1 15863508 15863564 - Protostomia Protostomia No 1
Mgi-Mir-87-P2 None MIR-87 UGAGCAA None None scaffold1600 146061 146122 + Protostomia Protostomia No 1
Lan-Mir-87-P2 None MIR-87 UGAGCAA None None LFEI01000460 49823 49883 + Protostomia Protostomia No 1
Isc-Mir-87-P2 isc-mir-87 MIR-87 UGAGCAA None MIMAT0012707 NW_024609880.1 72740057 72740115 - Protostomia Protostomia No 1
Hru-Mir-87-P2 None MIR-87 UGAGCAA None None JALGQA010000010.1 16273794 16273851 - Protostomia Protostomia No 1 1
Hme-Mir-87-P2 hme-mir-87 MIR-87 UGAGCAA None MIMAT0024989 HE668834 53115 53175 + Protostomia Protostomia No
Dlo-Mir-87-P2 None MIR-87 UGAGCAA None None NC_087234.1 6739834 6739922 - Protostomia Protostomia No 1
Dgr-Mir-87-P2 None MIR-87 UGAGCAA None None CAJFCJ010000001.1 484913 484974 - Protostomia Protostomia Unknown
Cte-Mir-87-P2 cte-mir-87a MIR-87 UGAGCAA None MIMAT0009518 CAPTEscaffold_222 219067 219151 - Protostomia Protostomia No 1
Aga-Mir-87-P2 aga-mir-87 MIR-87 UGAGCAA None MIMAT0007858 NC_064600.1 288422 288486 - Protostomia Protostomia No 1
Aae-Mir-87-P2 aae-mir-87 MIR-87 UGAGCAA None MIMAT0014252 supercont1.360 1010798 1010867 + Protostomia Protostomia No 1 1
Lpo-Mir-87-P1j None MIR-87 UGAGCAA None None NW_013672524.1 1301 1364 + L. polyphemus Protostomia No
Lpo-Mir-87-P1i None MIR-87 UGAGCAA None None NW_013674525.1 9051 9111 - L. polyphemus Protostomia No
Lpo-Mir-87-P1h None MIR-87 UGAGCAA None None NW_013667735.1 132492 132555 + L. polyphemus Protostomia No 1
Lpo-Mir-87-P1g None MIR-87 UGAGCAA None None NW_013665613.1 1477323 1477382 - L. polyphemus Protostomia No
Lpo-Mir-87-P1f None MIR-87 UGAGCAA None None NW_013665665.1 445290 445350 - L. polyphemus Protostomia No 1
Lpo-Mir-87-P1e None MIR-87 UGAGCAA None None NW_013665700.1 1212340 1212400 + L. polyphemus Protostomia No 1 1
Lpo-Mir-87-P1d None MIR-87 UGAGCAA None None NW_013665817.1 444807 444867 + L. polyphemus Protostomia No
Lpo-Mir-87-P1c None MIR-87 UGAGCAA None None NW_013666175.1 461346 461406 + L. polyphemus Protostomia No 1
Tca-Mir-87-P1 tca-mir-87a MIR-87 UGAGCAA MIMAT0019110 MIMAT0008366 LG6 1499347 1499408 + Protostomia Protostomia No 1 1 1
Snu-Mir-87-P1 None MIR-87 UGAGCAA None None CM049318.1 65885024 65885079 + Protostomia Protostomia No 1 1
Pve-Mir-87-P1 None MIR-87 UGAGCAA None None Pve_Chr1 171050014 171050072 - Protostomia Protostomia No 1 1
Pau-Mir-87-P1 None MIR-87 UGAGCAA None None NMRA01000440.1 155956 156014 - Protostomia Protostomia No 1
Ofu-Mir-87-P1 None MIR-87 UGAGCAA None None CAIIXF020000007.1 15864089 15864146 - Protostomia Protostomia No
Mgi-Mir-87-P1 None MIR-87 UGAGCAA None None scaffold1600 144750 144808 + Protostomia Protostomia No 1
Lgi-Mir-87-P1 lgi-mir-87 MIR-87 UGAGCAA None MIMAT0009573 LOTGIsca_160 256830 256887 + Protostomia Protostomia No 1
Lan-Mir-87-P1 None MIR-87 UGAGCAA None None LFEI01000460 49414 49469 + Protostomia Protostomia No 1
Isc-Mir-87-P1 None MIR-87 UGAGCAA None None NW_024609880.1 72740477 72740537 - Protostomia Protostomia No 1 1
Hru-Mir-87-P1 None MIR-87 UGAGCAA None None JALGQA010000010.1 16274339 16274397 - Protostomia Protostomia No 1
Dlo-Mir-87-P1 None MIR-87 UGAGCAA None None NC_087234.1 6740344 6740408 - Protostomia Protostomia No 1 1 1
Dgr-Mir-87-P1 None MIR-87 UGAGCAA None None CAJFCJ010000001.1 1983940 1983996 - Protostomia Protostomia Unknown 1
Cte-Mir-87-P1 cte-mir-87b MIR-87 UGAGCAA None MIMAT0009519 CAPTEscaffold_222 219605 219665 - Protostomia Protostomia No 1
Bge-Mir-87-P1 None MIR-87 UGAGCAA None None KZ618078.1 9512 9567 - Protostomia Protostomia No 1
Gsa-Mir-87-o42 gsa-mir-87 MIR-87 UGAGCAA MIMAT0035242 MIMAT0035243 scf7180006949880 3080 3200 + G. salaris Protostomia No 1
Tur-Mir-87-o41 None MIR-87 UGAGCAA None None HE587301.1 4414906 4414965 - T. urticae Protostomia No
Tur-Mir-87-o40 None MIR-87 UGAGCAA None None HE587301.1 4415090 4415158 - T. urticae Protostomia No 1
Tur-Mir-87-o39 tur-mir-87 MIR-87 AGCCGGA MIMAT0023066 MIMAT0023067 HE587301.1 4415225 4415289 - T. urticae Protostomia No 1
Tur-Mir-87-o38 None MIR-87 UGAGCAA None None HE587301.1 4415425 4415497 - T. urticae Protostomia No 1
Pcr-Mir-87-o37 None MIR-87 UGAGCAA None None CAJQUW010012358.1 219856 219918 + P. crozeri Protostomia No 1
Pcr-Mir-87-o36 None MIR-87 UGAGCAA None None CAJQUW010009582.1 475188 475248 + P. crozeri Protostomia No 1
Ava-Mir-87-o35 None MIR-87 UGAGCAA None None CP075495.1 14830059 14830122 - A. vaga Protostomia No 1
Ava-Mir-87-o34 None MIR-87 UGAGCAA None None CP075494.1 5671659 5671722 + A. vaga Protostomia No 1 1
Pdu-Mir-87-o33 None MIR-87 UGAGCAA None None JAPTHN010000001.1 126238903 126238960 + P. dumerilii Protostomia No 1
Sma-Mir-87-o32 None MIR-87 UGAGCAA None None HE601626.3 12868984 12869221 - Protostomia Protostomia No 1
Dgr-Mir-87-o31 None MIR-87 UGAGCAA None None CAJFCJ010000025.1 485505 485557 + D. gyrociliatus Protostomia Unknown 1
Dgr-Mir-87-o30 None MIR-87 UGAGCAA None None CAJFCJ010000002.1 1617521 1617573 + D. gyrociliatus Protostomia Unknown 1
War-Mir-87-o29 None MIR-87 UGAGCAA None None WNLI01038430.1 816 873 - Aculifera Protostomia No 1 1
Mom-Mir-87-o29 None MIR-87 UGAGCAA None None JARFOD010087928.1 5453 5513 - Aculifera Protostomia No 1 1
Eba-Mir-87-o29 None MIR-87 UGAGCAA None None WURV02181321.1 1231 1289 - Aculifera Protostomia No 1 1
Agr-Mir-87-o29 None MIR-87 UGAGCAA None None JABBOT010000014.1 11932562 11932622 + Aculifera Protostomia No 1
Egr-Mir-87-o28 egr-mir-87 MIR-87 UGAGCAA MIMAT0020238 MIMAT0020239 APAU02000009.1 962336 962429 - E. granulosus Protostomia No 1
Llo-Mir-87-o26 None MIR-87 UGAGCAA None None OU343007.1 5143736 5143795 + Lineidae Protostomia No 1 1
Llo-Mir-87-o25 None MIR-87 UGAGCAA None None OU343007.1 5143452 5143509 + Lineidae Protostomia No 1 1
Llo-Mir-87-o24 None MIR-87 UGAGCAA None None OU343007.1 5142453 5142511 + Lineidae Protostomia No 1
Pca-Mir-87-o23 None MIR-87 UGAGCAA None None KQ715148.1 408163 408224 + P. caudatus Protostomia No 1
Pca-Mir-87-o22 None MIR-87 UGAGCAA None None KQ715638.1 116649 116711 + P. caudatus Protostomia No 1
Rph-Mir-87-o21 None MIR-87 UGAGCAA None None CM018532.1 24177000 24177060 - R. philippinarum Protostomia No 1
Rph-Mir-87-o20 None MIR-87 UGAGCAA None None CM018532.1 24178272 24178331 - R. philippinarum Protostomia No 1
Rph-Mir-87-o19 None MIR-87 UGAGCAA None None CM018532.1 24178980 24179040 - R. philippinarum Protostomia No 1
Efe-Mir-87-o18 None MIR-87 CGCCUGA None None Efet.01.588090 349 410 - E. fetida Protostomia No
Efe-Mir-87-o17 None MIR-87 UGAGCAA None None Efet.01.649873 298 359 + E. fetida Protostomia No
Efe-Mir-87-o16 None MIR-87 UGAGCAA None None Efet.01.244941 2060 2124 + E. fetida Protostomia No 1 1
Efe-Mir-87-o15 None MIR-87 UGAGCAA None None Efet.01.241300 131 190 - E. fetida Protostomia No 1 1 1
Efe-Mir-87-o14 None MIR-87 UGAGCAA None None Efet.01.53011 1093 1153 - E. fetida Protostomia No
Efe-Mir-87-o13 None MIR-87 UGAGCAA None None scaffold4028-size35901 11038 11096 - E. fetida Protostomia No
Efe-Mir-87-o12 None MIR-87 UGAGCAA None None Efet.01.236014 861 925 + E. fetida Protostomia No
Sme-Mir-87-o11 sme-mir-87d MIR-87 UGAGCAA MIMAT0012136 MIMAT0011235 NNSW01000320_dd_Smes_g4_320 69423 69485 - S. mediterranea Protostomia No 1
Sme-Mir-87-o10 sme-mir-87c MIR-87 UGAGCAA MIMAT0012133 MIMAT0011228 NNSW01000019_dd_Smes_g4_19 1464537 1464595 + S. mediterranea Protostomia No 1
Sme-Mir-87-o9 sme-mir-87b MIR-87 UGAGCAA MIMAT0012110 MIMAT0003990 NNSW01000183_dd_Smes_g4_183 1003279 1003349 + S. mediterranea Protostomia No 1
Sme-Mir-87-o8 sme-mir-87a MIR-87 CACUUGG MIMAT0012109 MIMAT0003989 NNSW01000072_dd_Smes_g4_72 3052486 3052550 - S. mediterranea Protostomia No
Bpl-Mir-87-o7 None MIR-87 UGAGCAA None None QEOQ01000573.1 507118 507197 + Brachionus Protostomia No 1
Bko-Mir-87-o7 None MIR-87 UGAGCAA None None PJRA01000263.1 5959829 5959907 - Brachionus Protostomia No 1
Ovu-Mir-87-o6 None MIR-87 UGAGCAA None None RXHP01053711.1 39863 39923 - Coleoidea Protostomia No 1
Obi-Mir-87-o6 None MIR-87 UGAGCAA None None KQ425069 58011 58071 - Coleoidea Protostomia No 1
Esc-Mir-87-o6 None MIR-87 UGAGCAA None None CM044525.1 54031820 54031880 - Coleoidea Protostomia No 1
Dpu-Mir-87-o5b None MIR-87 UGAGCAA None None DAPPUscaffold_1 2191079 2191142 + Daphnia Protostomia No 1
Dma-Mir-87-o5b None MIR-87 UGAGCAA None None NC_046176.1 6157168 6157231 - Daphnia Protostomia No 1
Dpu-Mir-87-o5a None MIR-87 UGAGCAA None None DAPPUscaffold_1 2190896 2190980 + Daphnia Protostomia No 1
Dma-Mir-87-o5a None MIR-87 UGAGCAA None None NC_046176.1 6157349 6157434 - Daphnia Protostomia No 1
Asu-Mir-87-o4 asu-mir-87b MIR-87 UGAGCAA MIMAT0021483 MIMAT0021484 Scaffold299 383882 383941 - A.suum Protostomia No
Asu-Mir-87-o3 asu-mir-87a MIR-87 UGAGCAA MIMAT0021481 MIMAT0021482 Scaffold253 297752 297814 - A.suum Protostomia No 1
Cel-Mir-87-o2 cel-mir-233 MIR-87 UGAGCAA MIMAT0020329 MIMAT0000288 chrX 12078602 12078666 - Caenorhabditis Protostomia No
Cbr-Mir-87-o2 cbr-mir-233 MIR-87 UGAGCAA None MIMAT0000498 X 1737042 1737108 + Caenorhabditis Protostomia No
Cel-Mir-87-o1 cel-mir-87 MIR-87 UGAGCAA MIMAT0020325 MIMAT0000060 chrV 12038700 12038765 - Caenorhabditis Protostomia No
Cbr-Mir-87-o1 cbr-mir-87 MIR-87 UGAGCAA None MIMAT0000492 V 8974034 8974098 + Caenorhabditis Protostomia No 1
Sne-Mir-87 None MIR-87 UGAGCAA None None k141_1231 19330 19461 - Protostomia Protostomia No
Gsp-Mir-87 None MIR-87 UGAGCAA None None OX940786.1 16607064 16607129 - Protostomia Protostomia No

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