| MirGeneDB ID | Obi-Mir-87-o6 |
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| Family name |
MIR-87 (all species) |
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| Species |
California two-spot octopus (Octopus bimaculoides) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
Esc-Mir-87-o6
Gsp-Mir-87
Ovu-Mir-87-o6
Sne-Mir-87
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| Node of Origin (locus) |
Coleoidea
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| Node of Origin (family) |
Protostomia
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Genome context
(PRJNA270931_OBI) |
KQ425069: 58011-58071 [-]
Ensembl
|
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| Seed |
UGAGCAA |
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Precursor
(pre-Mir +30nt flank) |
UAUAGAAAUGUGAAUUCUGGUCCGUCAGUCCGGCCUGAAAUUUUGACUCUGACCUCUUCAUCAAAGAAGGUGAGCAAAGUUUCAGGUGUAGUUGAUGGCCCAAAAAAUCAUCCUUUCUAUU
Get precursor sequence
|
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| Structure | 10 20 30 40 50 60
UAUAGAAAUGUGAAUUC--| U UCCG A UG CUUCA
UGG CCGUCAG GCCUGAAAUUUUG CUC ACCU U
ACC GGUAGUU UGGACUUUGAAAC GAG UGGA C
UUAUCUUUCCUACUAAAAA^ C GAUG - -- AGAAA
. 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
|
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| Comment | It is not clear whether this is a descendant of the original Mir-87-P1 or -P2 gene. |
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| 3' NTU |
No
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
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| Star sequence |
Obi-Mir-87-o6_5p* |
| mirBase accession | None |
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| Sequence |
0- CGGCCUGAAAUUUUGACUCUGACCU -25
Get sequence
|
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| Mature sequence |
Obi-Mir-87-o6_3p |
| mirBase accession | None |
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| Sequence |
39- GUGAGCAAAGUUUCAGGUGUAG -61
Get sequence
|
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