MirGeneDB 3.0

106 microRNA genes with seed AGCUGCC
Sort by genome coordinates Motifs
MirGeneDB ID MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) Iso­miR 3' NTU  UG  UGUG CNNC
Pcr-Mir-22-P2m None MIR-22 AGCUGCC None None CAJQUW010003990.1 30453 30514 + Bilateria Bilateria No 1 1 1
Pcr-Mir-22-P2l None MIR-22 AGCUGCC None None CAJQUW010003990.1 30259 30318 + Bilateria Bilateria No 1
Ofu-Mir-22-P2k None MIR-22 AGCUGCC None None CAIIXF020000012.1 1297290 1297347 - O. fusiformis Bilateria No 1
Ofu-Mir-22-P2j None MIR-22 AGCUGCC None None CAIIXF020000012.1 1297053 1297111 - O. fusiformis Bilateria No
Lpo-Mir-22-P2i None MIR-22 AGCUGCC None None NW_013666234.1 297414 297471 + L. polyphemus Bilateria No 1
Lpo-Mir-22-P2h None MIR-22 AGCUGCC None None NW_013666188.1 65508 65566 - L. polyphemus Bilateria No 1
Lpo-Mir-22-P2g None MIR-22 AGCUGCC None None NW_013668767.1 26063 26120 - L. polyphemus Bilateria No 1
Lpo-Mir-22-P2f None MIR-22 AGCUGCC None None NW_013670121.1 15031 15088 - L. polyphemus Bilateria No 1
Tca-Mir-22-P2 V tca-mir-980 MIR-22 GGCUCGU MIMAT0018864 MIMAT0018865 KQ972119 1428 1488 + Bilateria Bilateria 2 No 1 1
Cbr-Mir-22-P2 V cbr-mir-1822 MIR-22 AGCUGCC None MIMAT0011481 II 9704350 9704413 - Bilateria Bilateria 2 No
War-Mir-22-P2 None MIR-22 AGCUGCC None None WNLI01171902.1 2586 2643 + Bilateria Bilateria Unknown 1
Tur-Mir-22-P2 tur-mir-745 MIR-22 AGCUGCC MIMAT0023048 MIMAT0023049 HE587308.1 2281016 2281101 + Bilateria Bilateria No
Snu-Mir-22-P2 None MIR-22 AGCUGCC None None CM049312.1 33087010 33087071 - Bilateria Bilateria No 1
Rph-Mir-22-P2 None MIR-22 AGCUGCC None None CM018526.1 21806394 21806455 + Bilateria Bilateria No 1
Pve-Mir-22-P2 None MIR-22 AGCUGCC None None Pve_Chr7 236402467 236402529 - Bilateria Bilateria No 1
Pdu-Mir-22-P2 None MIR-22 GUUCCUU None None JAPTHN010000002.1 75489904 75489964 - Bilateria Bilateria No 1
Pca-Mir-22-P2 None MIR-22 AGCUGCC None None KQ715371.1 217647 217708 + Bilateria Bilateria No 1 1
Pau-Mir-22-P2 None MIR-22 AGCUGCC None None NMRA01000012.1 2068729 2068787 + Bilateria Bilateria No 1 1
Ovu-Mir-22-P2 None MIR-22 AGCUGCC None None RXHP01036531.1 27585 27641 - Bilateria Bilateria No 1 1
Npo-Mir-22-P2 None MIR-22 AGCUGCC None None JACATO010000578.1 916031 916089 + Bilateria Bilateria Unknown
Mom-Mir-22-P2 None MIR-22 AGCUGCC None None JARFOD010027384.1 4453 4512 - Bilateria Bilateria No 1
Mgi-Mir-22-P2 None MIR-22 AGCUGCC None None scaffold726 81942 82005 - Bilateria Bilateria No 1
Llo-Mir-22-P2 None MIR-22 AGCUGCC None None OU342993.1 20246176 20246235 - Bilateria Bilateria No 1
Lhy-Mir-22-P2 None MIR-22 AGCUGCC None None scaffold412331_35.5 2509 2567 - Bilateria Bilateria No 1
Lgi-Mir-22-P2 lgi-mir-745b MIR-22 AGCUGCC None MIMAT0009599 LOTGIsca_20 382169 382227 + Bilateria Bilateria No 1
Lan-Mir-22-P2 None MIR-22 AGCUGCC None None LFEI01000044 311763 311822 + Bilateria Bilateria No
Isc-Mir-22-P2 None MIR-22 AGCUGCC None None NW_024609846.1 68352105 68352165 + Bilateria Bilateria No 1
Hru-Mir-22-P2 None MIR-22 AGCUGCC None None JALGQA010000015.1 6470641 6470697 - Bilateria Bilateria No 1
Hme-Mir-22-P2 hme-mir-745 MIR-22 AGCUGCC None MIMAT0024986 HE671337 442728 442786 - Bilateria Bilateria No 1
Gpa-Mir-22-P2 None MIR-22 AGCUGCC None None Scaffold338 26389 26451 + Bilateria Bilateria No 1
Esc-Mir-22-P2 None MIR-22 AGCUGCC None None CM044488.1 31957359 31957414 - Bilateria Bilateria No 1 1
Eba-Mir-22-P2 None MIR-22 AGCUGCC None None WURV02168762.1 13875 13934 - Bilateria Bilateria No 1
Dya-Mir-22-P2 None MIR-22 AGCUGCC None None X 117086 117152 - Bilateria Bilateria No 1
Dsi-Mir-22-P2 dsi-mir-980 MIR-22 AGCUGCC MIMAT0012481 MIMAT0012482 X 113167 113233 - Bilateria Bilateria No 1
Dpu-Mir-22-P2 dpu-mir-745 MIR-22 GGUCCUU None MIMAT0012646 DAPPUscaffold_63 361996 362061 - Bilateria Bilateria No 1
Dmo-Mir-22-P2 None MIR-22 AGCUGCC None None scaffold_6473 11075574 11075640 + Bilateria Bilateria No 1 1
Dme-Mir-22-P2 dme-mir-980 MIR-22 AGCUGCC MIMAT0020877 MIMAT0005496 X 280188 280254 - Bilateria Bilateria No 1
Dlo-Mir-22-P2 None MIR-22 AGCUGCC None None NC_087230.1 3340769 3340831 - Bilateria Bilateria No 1
Dan-Mir-22-P2 None MIR-22 AGCUGCC None None scaffold_13117 4815211 4815276 - Bilateria Bilateria No 1
Cte-Mir-22-P2 cte-mir-745b MIR-22 AGCUGCC None MIMAT0009546 CAPTEscaffold_133 228627 228683 + Bilateria Bilateria No 1
Csc-Mir-22-P2 None MIR-22 GUCCAUC None None NW_019384373.1 323358 323414 + Bilateria Bilateria No 1 1 1
Cel-Mir-22-P2 cel-mir-1822 MIR-22 AGCUGCC MIMAT0015266 MIMAT0006589 chrII 6015552 6015612 + Bilateria Bilateria No
Bge-Mir-22-P2 None MIR-22 AGCUGCC None None KZ616253.1 43902 43964 + Bilateria Bilateria No 1 1
Asu-Mir-22-P2 asu-mir-1822 MIR-22 AGCUGCC MIMAT0021535 MIMAT0021536 Scaffold1417 35061 35121 - Bilateria Bilateria No 1 1
Agr-Mir-22-P2 None MIR-22 AGCUGCC None None JABBOT010000009.1 8929893 8929950 + Bilateria Bilateria No 1
Aae-Mir-22-P2 aae-mir-980 MIR-22 AGCUGCC MIMAT0014235 MIMAT0014236 supercont1.23 1043029 1043091 + Bilateria Bilateria No
Pma-Mir-22-P1o3 pma-mir-22a MIR-22 AGCUGCC MIMAT0019398 MIMAT0019399 NC_046073.1 16942602 16942664 - P. marinus Bilateria No 1
Pma-Mir-22-P1o2 pma-mir-22b MIR-22 AGCUGCC MIMAT0019400 MIMAT0019401 NC_046106.1 10906046 10906112 - P. marinus Bilateria No 1
Ebu-Mir-22-P1o1 None MIR-22 AGCUGCC None None FYBX02010605.1 939050 939111 + E. burgeri Bilateria No 1
Xla-Mir-22-P1b4 xla-mir-22 MIR-22 GUUCUUC MIMAT0046540 MIMAT0046541 NC_030727.1 33649106 33649167 - X. laevis Bilateria No 1 1
Xla-Mir-22-P1b3 None MIR-22 GUUCUUC None None NC_030726.1 44743948 44744009 + X. laevis Bilateria No 1 1
Tni-Mir-22-P1b2 None MIR-22 AGCUGCC None None 7 8307611 8307673 - Clupeocephala Bilateria No 1
Mal-Mir-22-P1b2 None MIR-22 AGCUGCC None None KV884887.1 86444 86506 - Clupeocephala Bilateria No 1
Gmo-Mir-22-P1b2 gmo-mir-22a-2 MIR-22 AGCUGCC MIMAT0044276 MIMAT0044132 GeneScaffold_4258 86653 86715 - Clupeocephala Bilateria No 1
Dre-Mir-22-P1b2 None MIR-22 AGCUGCC None None chr21 39267231 39267293 - Clupeocephala Bilateria No 1
Tni-Mir-22-P1b1 tni-mir-22a MIR-22 AGCUGCC None MIMAT0003100 10 10460516 10460578 + Clupeocephala Bilateria No 1 1
Mal-Mir-22-P1b1 None MIR-22 AGCUGCC None None KV884733.1 910104 910166 + Clupeocephala Bilateria No 1 1
Gmo-Mir-22-P1b1 gmo-mir-22a-1 MIR-22 AGCUGCC MIMAT0044131 MIMAT0044132 GeneScaffold_1627 222059 222120 - Clupeocephala Bilateria No 1 1
Dre-Mir-22-P1b1 dre-mir-22a MIR-22 AGCUGCC MIMAT0031942 MIMAT0001788 chr15 24908404 24908466 - Clupeocephala Bilateria No 1
Xtr-Mir-22-P1b xtr-mir-22 MIR-22 AGCUGCC MIMAT0003671 MIMAT0003672 chr2 40225984 40226045 + Vertebrata Bilateria No 1 1
Tgu-Mir-22-P1b None MIR-22 AGCUGCC None None 19 4804172 4804234 + Vertebrata Bilateria No 1 1
Sto-Mir-22-P1b None MIR-22 AGCUGCC None None BFAA01000512.1 189391 189453 + Vertebrata Bilateria No 1 1
Spt-Mir-22-P1b None MIR-22 AGCUGCC None None QEPC01008384.1 3512951 3513012 + Vertebrata Bilateria Unknown 1 1
Sha-Mir-22-P1b None MIR-22 AGCUGCC None None AFEY01011013_Mir-22-P1a 1533 1592 + Vertebrata Bilateria No 1 1
Rno-Mir-22-P1b rno-mir-22 MIR-22 AGCUGCC MIMAT0003152 MIMAT0000791 chr10 62299610 62299669 + Vertebrata Bilateria No 1 1
Pbv-Mir-22-P1b pbv-mir-22 MIR-22 AGCUGCC MIMAT0038851 MIMAT0038852 KE957638.1 96463 96524 - Vertebrata Bilateria No 1
Pab-Mir-22-P1b None MIR-22 AGCUGCC None None CM054698.2 1513896 1513955 - Vertebrata Bilateria No 1 1
Ocu-Mir-22-P1b ocu-mir-22 MIR-22 AGCUGCC MIMAT0048126 MIMAT0048127 chr19 16435658 16435717 + Vertebrata Bilateria No 1 1
Oan-Mir-22-P1b oan-mir-22 MIR-22 AGCUGCC MIMAT0006961 MIMAT0006962 NC_041744.1 5697962 5698021 + Vertebrata Bilateria No 1
Neu-Mir-22-P1b None MIR-22 AGCUGCC None None CM051814.1 39747960 39748019 - Vertebrata Bilateria No 1 1
Mun-Mir-22-P1b None MIR-22 AGCUGCC None None LR594644.1 62098198 62098259 + Vertebrata Bilateria No 1 1
Mmu-Mir-22-P1b mmu-mir-22 MIR-22 AGCUGCC MIMAT0004629 MIMAT0000531 chr11 75463734 75463793 + Vertebrata Bilateria No 1 1
Mmr-Mir-22-P1b mmr-mir-22 MIR-22 AGCUGCC None MIMAT0049184 CM007676.1 47459679 47459738 - Vertebrata Bilateria No 1 1
Mml-Mir-22-P1b mml-mir-22 MIR-22 AGCUGCC None MIMAT0002330 CM014351.1 1567963 1568022 - Vertebrata Bilateria No 1 1
Mdo-Mir-22-P1b mdo-mir-22 MIR-22 AGCUGCC MIMAT0026651 MIMAT0004092 2 517205534 517205593 - Vertebrata Bilateria No 1 1
Loc-Mir-22-P1b None MIR-22 AGCUGCC None None LG22 6256492 6256554 + Vertebrata Bilateria No 1 1
Lch-Mir-22-P1b None MIR-22 AGCUGCC None None JH127856.1 309481 309543 + Vertebrata Bilateria Unknown 1 1
Laf-Mir-22-P1b None MIR-22 AGCUGCC None None GL010074.1 4903016 4903075 - Vertebrata Bilateria No 1 1
Hsa-Mir-22-P1b hsa-mir-22 MIR-22 AGCUGCC MIMAT0004495 MIMAT0000077 chr17 1713914 1713973 - Vertebrata Bilateria No 1 1
Gja-Mir-22-P1b None MIR-22 AGCUGCC None None NW_015173122.1 916413 916474 - Vertebrata Bilateria No 1 1
Gga-Mir-22-P1b gga-mir-22 MIR-22 AGCUGCC MIMAT0007287 MIMAT0007288 19 5528034 5528096 - Vertebrata Bilateria No 1 1
Ete-Mir-22-P1b None MIR-22 AGCUGCC None None JH980319 1672640 1672699 + Vertebrata Bilateria No 1 1
Eca-Mir-22-P1b eca-mir-22 MIR-22 AGCUGCC None MIMAT0013031 CM009158.1 45699965 45700024 - Vertebrata Bilateria No 1 1
Dno-Mir-22-P1b dno-mir-22 MIR-22 AGCUGCC MIMAT0047526 MIMAT0047527 JH582994 772340 772399 + Vertebrata Bilateria No 1 1
Cpo-Mir-22-P1b cpo-mir-22 MIR-22 AGCUGCC MIMAT0046874 MIMAT0046875 scaffold_32 20705576 20705635 + Vertebrata Bilateria No 1 1
Cpi-Mir-22-P1b cpi-mir-22 MIR-22 AGCUGCC MIMAT0037653 MIMAT0037654 JH584690 8378147 8378209 + Vertebrata Bilateria No 1
Cmi-Mir-22-P1b None MIR-22 AGCUGCC None None KI635901.1 4512697 4512759 + Vertebrata Bilateria No 1 1
Cli-Mir-22-P1b cli-mir-22 MIR-22 AGCUGCC MIMAT0038438 MIMAT0038439 scaffold94 2621552 2621614 - Vertebrata Bilateria No 1 1
Cja-Mir-22-P1b None MIR-22 AGCUGCC None None CM021919.1 62605069 62605128 + Vertebrata Bilateria No 1 1
Cfa-Mir-22-P1b cfa-mir-22 MIR-22 AGCUGCC None MIMAT0006733 chr9 45852534 45852593 - Vertebrata Bilateria No 1 1
Bta-Mir-22-P1b bta-mir-22 MIR-22 AGCUGCC MIMAT0003826 MIMAT0012536 NC_037346.1 22811579 22811638 - Vertebrata Bilateria No 1 1
Ami-Mir-22-P1b None MIR-22 AGCUGCC None None NW_017708683.1 31 90 + Vertebrata Bilateria No 1
Aca-Mir-22-P1b None MIR-22 AGCUGCC None None SRR150218727584143 38 101 + Vertebrata Bilateria No 1
Tni-Mir-22-P1a tni-mir-22b MIR-22 AGCUGCC None MIMAT0003046 12 6138920 6138983 + Vertebrata Bilateria No 1 1
Sto-Mir-22-P1a None MIR-22 AGCUGCC None None BFAA01002408.1 121892 121951 + Vertebrata Bilateria No
Mal-Mir-22-P1a None MIR-22 AGCUGCC None None KV884711.1 3584290 3584352 + Vertebrata Bilateria No 1 1
Loc-Mir-22-P1a None MIR-22 AGCUGCC None None LG20 5528215 5528274 + Vertebrata Bilateria No 1
Lch-Mir-22-P1a None MIR-22 AGCUGCC None None JH126621.1 2124056 2124115 - Vertebrata Bilateria Unknown
Gmo-Mir-22-P1a gmo-mir-22b MIR-22 AGCUGCC MIMAT0044037 MIMAT0044038 contig364380 190 249 + Vertebrata Bilateria No 1
Dre-Mir-22-P1a dre-mir-22b MIR-22 AGCUGCC MIMAT0031943 MIMAT0001789 chr5 12610815 12610873 + Vertebrata Bilateria No 1 1
Cmi-Mir-22-P1a None MIR-22 AGCUGCC None None KI636069.1 354886 354945 + Vertebrata Bilateria No 1 1
Pfl-Mir-22-P1 None MIR-22 AGCUGCC None None LD346721.1 581033 581090 - Bilateria Bilateria Unknown 1
Pca-Mir-22-P1 None MIR-22 AGCUGCC None None KQ715371.1 217277 217331 + Bilateria Bilateria No 1
Bla-Mir-22-P1 None MIR-22 AGCUGCC None None Sc0000015 676729 676786 + Bilateria Bilateria No 1
Bfl-Mir-22-P1 bfl-mir-22 MIR-22 AGCUGCC MIMAT0019138 MIMAT0009470 NC_049989.1 18881875 18881932 - Bilateria Bilateria No 1
Bfl-Mir-22-o3d bfl-mir-4900b-1 MIR-22 AGCUGCC None MIMAT0020493 NC_049989.1 18866452 18866510 - B. floridae Bilateria No 1

(red - mature/co-mature, blue - star)

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