MirGeneDB 2.1
MirGeneDB ID

Aca-Mir-22-P1b

Family name MIR-22 (all species)
Seed AGCUGCC
Species Green anole lizard (Anolis carolinensis)
MiRBase ID
Paralogues
Orthologues Ami-Mir-22-P1b  Bfl-Mir-22-o1b  Bfl-Mir-22-P1  Bla-Mir-22-o1b  Bla-Mir-22-P1  Bpl-Mir-22-P1  Bta-Mir-22-P1b  Cfa-Mir-22-P1b  Cgi-Mir-22-P1  Cli-Mir-22-P1b  Cmi-Mir-22-P1b  Cpi-Mir-22-P1b  Cpo-Mir-22-P1b  Cte-Mir-22-P1  Dno-Mir-22-P1b  Dre-Mir-22-P1b1  Dre-Mir-22-P1b2  Esc-Mir-22-P1  Ete-Mir-22-P1b  Gga-Mir-22-P1b  Gja-Mir-22-P1b  Gmo-Mir-22-P1b1  Gmo-Mir-22-P1b2  Hsa-Mir-22-P1b  Lan-Mir-22-P1  Lch-Mir-22-P1b  Lgi-Mir-22-P1  Loc-Mir-22-P1b  Mal-Mir-22-P1b1  Mal-Mir-22-P1b2  Mdo-Mir-22-P1b  Mml-Mir-22-P1b  Mmu-Mir-22-P1b  Mun-Mir-22-P1b  Npo-Mir-22-P1  Oan-Mir-22-P1b  Obi-Mir-22-P1  Ocu-Mir-22-P1b  Ovu-Mir-22-P1  Pbv-Mir-22-P1b  Pfl-Mir-22-P1  Rno-Mir-22-P1b  Sha-Mir-22-P1b  Sme-Mir-22-P1  Spt-Mir-22-P1b  Sto-Mir-22-P1b  Tgu-Mir-22-P1b  Tni-Mir-22-P1b1  Tni-Mir-22-P1b2  Xla-Mir-22-P1b3  Xla-Mir-22-P1b4  Xtr-Mir-22-P1b 
Node of Origin (locus) Vertebrata
Node of Origin (family) Bilateria
Genome context
(anoCar2)		 SRR150218727584143: 38-101 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CUUCUUACCUUCCUCUGGCCCCCGCGCAGCAGUUCUUCAGCGGCAUCGCUUUACGUCCCCUUUAAGAAGCUAAAGCUGCCAGUUGAAGAACUGUUGGCCGGGGCCCCACGCCACCAGGAAGAGG
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Structure
        10           20        30        40         50        60  
CUUCUUACCUUCCUCUG---|    C  G               -    UC      CGUCCCCU 
                    GCCCC GC CAGCAGUUCUUCAGC GGCA  GCUUUA        \
                    CGGGG CG GUUGUCAAGAAGUUG CCGU  CGAAAU        U
GGAGAAGGACCACCGCACCC^    C  -               A    --      CGAAGAAU 
  120       110       100         90        80          70
Deep sequencing
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CommentNot in assembly but in trace archive.
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Sk To Wh
Star sequence

Aca-Mir-22-P1b_5p*
mirBase accessionNone
Sequence 
0- AGUUCUUCAGCGGCAUCGCUUUA -23
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Mature sequence

Aca-Mir-22-P1b_3p
mirBase accessionNone
Sequence 
42- AAGCUGCCAGUUGAAGAACUGU -64
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