MirGeneDB 3.0
MirGeneDB ID

Gmo-Mir-22-P1a

Family name MIR-22 (all species)
Species Cod (Gadus morhua)
MiRBase ID gmo-mir-22b
Paralogues Gmo-Mir-22-P1b1  Gmo-Mir-22-P1b2 
Orthologues Agr-Mir-22-P1  Bfl-Mir-22-P1  Bko-Mir-22-P1  Bla-Mir-22-P1  Bpl-Mir-22-P1  Cmi-Mir-22-P1a  Cte-Mir-22-P1  Dre-Mir-22-P1a  Eba-Mir-22-P1  Egr-Mir-22-P1  Esc-Mir-22-P1  Gsa-Mir-22-P1  Hru-Mir-22-P1  Lan-Mir-22-P1  Lch-Mir-22-P1a  Lgi-Mir-22-P1  Lhy-Mir-22-P1  Llo-Mir-22-P1  Loc-Mir-22-P1a  Mal-Mir-22-P1a  Mgi-Mir-22-P1  Mom-Mir-22-P1  Npo-Mir-22-P1  Obi-Mir-22-P1  Ofu-Mir-22-P1  Ovu-Mir-22-P1  Pau-Mir-22-P1  Pca-Mir-22-P1  Pcr-Mir-22-P1  Pdu-Mir-22-P1  Pfl-Mir-22-P1  Pve-Mir-22-P1  Rph-Mir-22-P1  Sma-Mir-22-P1  Sme-Mir-22-P1  Snu-Mir-22-P1  Sto-Mir-22-P1a  Tni-Mir-22-P1a  War-Mir-22-P1 
Node of Origin (locus) Vertebrata
Node of Origin (family) Bilateria
Genome context
(Gadus_morhua.gadMor1.dna.toplevel)		 contig364380: 190-249 [+] UCSC Ensembl
Seed AGCUGCC
Precursor
(pre-Mir +30nt flank)		 
GUAGGGCCGUCCAGCCCGGUGCAUCACAGUCGUUCUUCACUAGCUAGCUUUACGCCGCGCUCACGCUAAAGCUGCCAGUUGAAGAGCUGUUGUGAGUAACCAUGACAACCGGCCACCCCC
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Structure
        10          20        30         40        50         
GUAGGGCCGUCCAGCCC--   GCA      UC       -|  A  U       CGCCGC 
                   GGU   UCACAG  GUUCUUC ACU GC AGCUUUA      G
                   CCA   AGUGUU  CGAGAAG UGA CG UCGAAAU      C
CCCCCACCGGCCAACAGUA   AUG      GU       U^  C  -       CGCACU 
.       110       100        90        80         70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
Br Gi He In Li Sk Sp Wh
Star sequence

Gmo-Mir-22-P1a_5p*
mirBase accessionMIMAT0044037
Sequence 
0- CGUUCUUCACUAGCUAGCUUUA -22
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Mature sequence

Gmo-Mir-22-P1a_3p
mirBase accessionMIMAT0044038
Sequence 
38- AAGCUGCCAGUUGAAGAGCUGU -60
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