| MirGeneDB ID | Lch-Mir-22-P1a |
|---|---|
| Family name | MIR-22 (all species) |
| Species | Coelacanth (Latimeria chalumnae) |
| MiRBase ID | |
| Paralogues | Lch-Mir-22-P1b |
| Orthologues | Agr-Mir-22-P1 Bfl-Mir-22-P1 Bko-Mir-22-P1 Bla-Mir-22-P1 Bpl-Mir-22-P1 Cmi-Mir-22-P1a Cte-Mir-22-P1 Dre-Mir-22-P1a Eba-Mir-22-P1 Egr-Mir-22-P1 Esc-Mir-22-P1 Gmo-Mir-22-P1a Gsa-Mir-22-P1 Hru-Mir-22-P1 Lan-Mir-22-P1 Lgi-Mir-22-P1 Lhy-Mir-22-P1 Llo-Mir-22-P1 Loc-Mir-22-P1a Mal-Mir-22-P1a Mgi-Mir-22-P1 Mom-Mir-22-P1 Npo-Mir-22-P1 Obi-Mir-22-P1 Ofu-Mir-22-P1 Ovu-Mir-22-P1 Pau-Mir-22-P1 Pca-Mir-22-P1 Pcr-Mir-22-P1 Pdu-Mir-22-P1 Pfl-Mir-22-P1 Pve-Mir-22-P1 Rph-Mir-22-P1 Sma-Mir-22-P1 Sme-Mir-22-P1 Snu-Mir-22-P1 Sto-Mir-22-P1a Tni-Mir-22-P1a War-Mir-22-P1 |
| Node of Origin (locus) | Vertebrata |
| Node of Origin (family) | Bilateria |
| Genome context (LatCha1_add) |
JH126621.1: 2124056-2124115 [-] Ensembl |
| Seed | AGCUGCC |
| Precursor (pre-Mir +30nt flank) |
AUCAGUGCAGAGUAAACGUUGUACCACAGUCGUUCUUCACUGGCUAACUUUAUUGACUUGUAUAUGUAAAGCUGCCAGUUGAAGAGCUGUUGUGGGCAACCCUAAUCAUUUUAUCAACUGGet precursor sequence |
| Structure | 10 20 30 40 50 AUCAGUGCAGAGUAAAC---| A UC - UAA UUGACU GUUGU CCACAG GUUCUUCA CUGGC CUUUA U CAACG GGUGUU CGAGAAGU GACCG GAAAU G GUCAACUAUUUUACUAAUCC^ - GU U UC- GUAUAU . 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | No |
| Star sequence | Lch-Mir-22-P1a_5p* (predicted) |
| mirBase accession | None |
| Sequence |
0- CGUUCUUCACUGGCUAACUUUA -22
Get sequence
|
| Mature sequence | Lch-Mir-22-P1a_3p (predicted) |
| mirBase accession | None |
| Sequence |
38- AAGCUGCCAGUUGAAGAGCUGU -60
Get sequence
|
