MirGeneDB 3.0
106 microRNA genes with seed AGCUGCC
Sort by genome coordinates Motifs
MirGeneDB ID ▲ MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) Iso­miR 3' NTU  UG  UGUG CNNC
Bfl-Mir-22-o3d bfl-mir-4900b-1 MIR-22 AGCUGCC None MIMAT0020493 NC_049989.1 18866452 18866510 - B. floridae Bilateria No 1
Bfl-Mir-22-P1 bfl-mir-22 MIR-22 AGCUGCC MIMAT0019138 MIMAT0009470 NC_049989.1 18881875 18881932 - Bilateria Bilateria No 1
Bla-Mir-22-P1 None MIR-22 AGCUGCC None None Sc0000015 676729 676786 + Bilateria Bilateria No 1
Pca-Mir-22-P1 None MIR-22 AGCUGCC None None KQ715371.1 217277 217331 + Bilateria Bilateria No 1
Pfl-Mir-22-P1 None MIR-22 AGCUGCC None None LD346721.1 581033 581090 - Bilateria Bilateria Unknown 1
Cmi-Mir-22-P1a None MIR-22 AGCUGCC None None KI636069.1 354886 354945 + Vertebrata Bilateria No 1 1
Dre-Mir-22-P1a dre-mir-22b MIR-22 AGCUGCC MIMAT0031943 MIMAT0001789 chr5 12610815 12610873 + Vertebrata Bilateria No 1 1
Gmo-Mir-22-P1a gmo-mir-22b MIR-22 AGCUGCC MIMAT0044037 MIMAT0044038 contig364380 190 249 + Vertebrata Bilateria No 1
Lch-Mir-22-P1a None MIR-22 AGCUGCC None None JH126621.1 2124056 2124115 - Vertebrata Bilateria Unknown
Loc-Mir-22-P1a None MIR-22 AGCUGCC None None LG20 5528215 5528274 + Vertebrata Bilateria No 1
Mal-Mir-22-P1a None MIR-22 AGCUGCC None None KV884711.1 3584290 3584352 + Vertebrata Bilateria No 1 1
Sto-Mir-22-P1a None MIR-22 AGCUGCC None None BFAA01002408.1 121892 121951 + Vertebrata Bilateria No
Tni-Mir-22-P1a tni-mir-22b MIR-22 AGCUGCC None MIMAT0003046 12 6138920 6138983 + Vertebrata Bilateria No 1 1
Aca-Mir-22-P1b None MIR-22 AGCUGCC None None SRR150218727584143 38 101 + Vertebrata Bilateria No 1
Ami-Mir-22-P1b None MIR-22 AGCUGCC None None NW_017708683.1 31 90 + Vertebrata Bilateria No 1
Bta-Mir-22-P1b bta-mir-22 MIR-22 AGCUGCC MIMAT0003826 MIMAT0012536 NC_037346.1 22811579 22811638 - Vertebrata Bilateria No 1 1
Cfa-Mir-22-P1b cfa-mir-22 MIR-22 AGCUGCC None MIMAT0006733 chr9 45852534 45852593 - Vertebrata Bilateria No 1 1
Cja-Mir-22-P1b None MIR-22 AGCUGCC None None CM021919.1 62605069 62605128 + Vertebrata Bilateria No 1 1
Cli-Mir-22-P1b cli-mir-22 MIR-22 AGCUGCC MIMAT0038438 MIMAT0038439 scaffold94 2621552 2621614 - Vertebrata Bilateria No 1 1
Cmi-Mir-22-P1b None MIR-22 AGCUGCC None None KI635901.1 4512697 4512759 + Vertebrata Bilateria No 1 1
Cpi-Mir-22-P1b cpi-mir-22 MIR-22 AGCUGCC MIMAT0037653 MIMAT0037654 JH584690 8378147 8378209 + Vertebrata Bilateria No 1
Cpo-Mir-22-P1b cpo-mir-22 MIR-22 AGCUGCC MIMAT0046874 MIMAT0046875 scaffold_32 20705576 20705635 + Vertebrata Bilateria No 1 1
Dno-Mir-22-P1b dno-mir-22 MIR-22 AGCUGCC MIMAT0047526 MIMAT0047527 JH582994 772340 772399 + Vertebrata Bilateria No 1 1
Eca-Mir-22-P1b eca-mir-22 MIR-22 AGCUGCC None MIMAT0013031 CM009158.1 45699965 45700024 - Vertebrata Bilateria No 1 1
Ete-Mir-22-P1b None MIR-22 AGCUGCC None None JH980319 1672640 1672699 + Vertebrata Bilateria No 1 1
Gga-Mir-22-P1b gga-mir-22 MIR-22 AGCUGCC MIMAT0007287 MIMAT0007288 19 5528034 5528096 - Vertebrata Bilateria No 1 1
Gja-Mir-22-P1b None MIR-22 AGCUGCC None None NW_015173122.1 916413 916474 - Vertebrata Bilateria No 1 1
Hsa-Mir-22-P1b hsa-mir-22 MIR-22 AGCUGCC MIMAT0004495 MIMAT0000077 chr17 1713914 1713973 - Vertebrata Bilateria No 1 1
Laf-Mir-22-P1b None MIR-22 AGCUGCC None None GL010074.1 4903016 4903075 - Vertebrata Bilateria No 1 1
Lch-Mir-22-P1b None MIR-22 AGCUGCC None None JH127856.1 309481 309543 + Vertebrata Bilateria Unknown 1 1
Loc-Mir-22-P1b None MIR-22 AGCUGCC None None LG22 6256492 6256554 + Vertebrata Bilateria No 1 1
Mdo-Mir-22-P1b mdo-mir-22 MIR-22 AGCUGCC MIMAT0026651 MIMAT0004092 2 517205534 517205593 - Vertebrata Bilateria No 1 1
Mml-Mir-22-P1b mml-mir-22 MIR-22 AGCUGCC None MIMAT0002330 CM014351.1 1567963 1568022 - Vertebrata Bilateria No 1 1
Mmr-Mir-22-P1b mmr-mir-22 MIR-22 AGCUGCC None MIMAT0049184 CM007676.1 47459679 47459738 - Vertebrata Bilateria No 1 1
Mmu-Mir-22-P1b mmu-mir-22 MIR-22 AGCUGCC MIMAT0004629 MIMAT0000531 chr11 75463734 75463793 + Vertebrata Bilateria No 1 1
Mun-Mir-22-P1b None MIR-22 AGCUGCC None None LR594644.1 62098198 62098259 + Vertebrata Bilateria No 1 1
Neu-Mir-22-P1b None MIR-22 AGCUGCC None None CM051814.1 39747960 39748019 - Vertebrata Bilateria No 1 1
Oan-Mir-22-P1b oan-mir-22 MIR-22 AGCUGCC MIMAT0006961 MIMAT0006962 NC_041744.1 5697962 5698021 + Vertebrata Bilateria No 1
Ocu-Mir-22-P1b ocu-mir-22 MIR-22 AGCUGCC MIMAT0048126 MIMAT0048127 chr19 16435658 16435717 + Vertebrata Bilateria No 1 1
Pab-Mir-22-P1b None MIR-22 AGCUGCC None None CM054698.2 1513896 1513955 - Vertebrata Bilateria No 1 1
Pbv-Mir-22-P1b pbv-mir-22 MIR-22 AGCUGCC MIMAT0038851 MIMAT0038852 KE957638.1 96463 96524 - Vertebrata Bilateria No 1
Rno-Mir-22-P1b rno-mir-22 MIR-22 AGCUGCC MIMAT0003152 MIMAT0000791 chr10 62299610 62299669 + Vertebrata Bilateria No 1 1
Sha-Mir-22-P1b None MIR-22 AGCUGCC None None AFEY01011013_Mir-22-P1a 1533 1592 + Vertebrata Bilateria No 1 1
Spt-Mir-22-P1b None MIR-22 AGCUGCC None None QEPC01008384.1 3512951 3513012 + Vertebrata Bilateria Unknown 1 1
Sto-Mir-22-P1b None MIR-22 AGCUGCC None None BFAA01000512.1 189391 189453 + Vertebrata Bilateria No 1 1
Tgu-Mir-22-P1b None MIR-22 AGCUGCC None None 19 4804172 4804234 + Vertebrata Bilateria No 1 1
Xtr-Mir-22-P1b xtr-mir-22 MIR-22 AGCUGCC MIMAT0003671 MIMAT0003672 chr2 40225984 40226045 + Vertebrata Bilateria No 1 1
Dre-Mir-22-P1b1 dre-mir-22a MIR-22 AGCUGCC MIMAT0031942 MIMAT0001788 chr15 24908404 24908466 - Clupeocephala Bilateria No 1
Gmo-Mir-22-P1b1 gmo-mir-22a-1 MIR-22 AGCUGCC MIMAT0044131 MIMAT0044132 GeneScaffold_1627 222059 222120 - Clupeocephala Bilateria No 1 1
Mal-Mir-22-P1b1 None MIR-22 AGCUGCC None None KV884733.1 910104 910166 + Clupeocephala Bilateria No 1 1
Tni-Mir-22-P1b1 tni-mir-22a MIR-22 AGCUGCC None MIMAT0003100 10 10460516 10460578 + Clupeocephala Bilateria No 1 1
Dre-Mir-22-P1b2 None MIR-22 AGCUGCC None None chr21 39267231 39267293 - Clupeocephala Bilateria No 1
Gmo-Mir-22-P1b2 gmo-mir-22a-2 MIR-22 AGCUGCC MIMAT0044276 MIMAT0044132 GeneScaffold_4258 86653 86715 - Clupeocephala Bilateria No 1
Mal-Mir-22-P1b2 None MIR-22 AGCUGCC None None KV884887.1 86444 86506 - Clupeocephala Bilateria No 1
Tni-Mir-22-P1b2 None MIR-22 AGCUGCC None None 7 8307611 8307673 - Clupeocephala Bilateria No 1
Xla-Mir-22-P1b3 None MIR-22 GUUCUUC None None NC_030726.1 44743948 44744009 + X. laevis Bilateria No 1 1
Xla-Mir-22-P1b4 xla-mir-22 MIR-22 GUUCUUC MIMAT0046540 MIMAT0046541 NC_030727.1 33649106 33649167 - X. laevis Bilateria No 1 1
Ebu-Mir-22-P1o1 None MIR-22 AGCUGCC None None FYBX02010605.1 939050 939111 + E. burgeri Bilateria No 1
Pma-Mir-22-P1o2 pma-mir-22b MIR-22 AGCUGCC MIMAT0019400 MIMAT0019401 NC_046106.1 10906046 10906112 - P. marinus Bilateria No 1
Pma-Mir-22-P1o3 pma-mir-22a MIR-22 AGCUGCC MIMAT0019398 MIMAT0019399 NC_046073.1 16942602 16942664 - P. marinus Bilateria No 1
Aae-Mir-22-P2 aae-mir-980 MIR-22 AGCUGCC MIMAT0014235 MIMAT0014236 supercont1.23 1043029 1043091 + Bilateria Bilateria No
Agr-Mir-22-P2 None MIR-22 AGCUGCC None None JABBOT010000009.1 8929893 8929950 + Bilateria Bilateria No 1
Asu-Mir-22-P2 asu-mir-1822 MIR-22 AGCUGCC MIMAT0021535 MIMAT0021536 Scaffold1417 35061 35121 - Bilateria Bilateria No 1 1
Bge-Mir-22-P2 None MIR-22 AGCUGCC None None KZ616253.1 43902 43964 + Bilateria Bilateria No 1 1
Cel-Mir-22-P2 cel-mir-1822 MIR-22 AGCUGCC MIMAT0015266 MIMAT0006589 chrII 6015552 6015612 + Bilateria Bilateria No
Csc-Mir-22-P2 None MIR-22 GUCCAUC None None NW_019384373.1 323358 323414 + Bilateria Bilateria No 1 1 1
Cte-Mir-22-P2 cte-mir-745b MIR-22 AGCUGCC None MIMAT0009546 CAPTEscaffold_133 228627 228683 + Bilateria Bilateria No 1
Dan-Mir-22-P2 None MIR-22 AGCUGCC None None scaffold_13117 4815211 4815276 - Bilateria Bilateria No 1
Dlo-Mir-22-P2 None MIR-22 AGCUGCC None None NC_087230.1 3340769 3340831 - Bilateria Bilateria No 1
Dme-Mir-22-P2 dme-mir-980 MIR-22 AGCUGCC MIMAT0020877 MIMAT0005496 X 280188 280254 - Bilateria Bilateria No 1
Dmo-Mir-22-P2 None MIR-22 AGCUGCC None None scaffold_6473 11075574 11075640 + Bilateria Bilateria No 1 1
Dpu-Mir-22-P2 dpu-mir-745 MIR-22 GGUCCUU None MIMAT0012646 DAPPUscaffold_63 361996 362061 - Bilateria Bilateria No 1
Dsi-Mir-22-P2 dsi-mir-980 MIR-22 AGCUGCC MIMAT0012481 MIMAT0012482 X 113167 113233 - Bilateria Bilateria No 1
Dya-Mir-22-P2 None MIR-22 AGCUGCC None None X 117086 117152 - Bilateria Bilateria No 1
Eba-Mir-22-P2 None MIR-22 AGCUGCC None None WURV02168762.1 13875 13934 - Bilateria Bilateria No 1
Esc-Mir-22-P2 None MIR-22 AGCUGCC None None CM044488.1 31957359 31957414 - Bilateria Bilateria No 1 1
Gpa-Mir-22-P2 None MIR-22 AGCUGCC None None Scaffold338 26389 26451 + Bilateria Bilateria No 1
Hme-Mir-22-P2 hme-mir-745 MIR-22 AGCUGCC None MIMAT0024986 HE671337 442728 442786 - Bilateria Bilateria No 1
Hru-Mir-22-P2 None MIR-22 AGCUGCC None None JALGQA010000015.1 6470641 6470697 - Bilateria Bilateria No 1
Isc-Mir-22-P2 None MIR-22 AGCUGCC None None NW_024609846.1 68352105 68352165 + Bilateria Bilateria No 1
Lan-Mir-22-P2 None MIR-22 AGCUGCC None None LFEI01000044 311763 311822 + Bilateria Bilateria No
Lgi-Mir-22-P2 lgi-mir-745b MIR-22 AGCUGCC None MIMAT0009599 LOTGIsca_20 382169 382227 + Bilateria Bilateria No 1
Lhy-Mir-22-P2 None MIR-22 AGCUGCC None None scaffold412331_35.5 2509 2567 - Bilateria Bilateria No 1
Llo-Mir-22-P2 None MIR-22 AGCUGCC None None OU342993.1 20246176 20246235 - Bilateria Bilateria No 1
Mgi-Mir-22-P2 None MIR-22 AGCUGCC None None scaffold726 81942 82005 - Bilateria Bilateria No 1
Mom-Mir-22-P2 None MIR-22 AGCUGCC None None JARFOD010027384.1 4453 4512 - Bilateria Bilateria No 1
Npo-Mir-22-P2 None MIR-22 AGCUGCC None None JACATO010000578.1 916031 916089 + Bilateria Bilateria Unknown
Ovu-Mir-22-P2 None MIR-22 AGCUGCC None None RXHP01036531.1 27585 27641 - Bilateria Bilateria No 1 1
Pau-Mir-22-P2 None MIR-22 AGCUGCC None None NMRA01000012.1 2068729 2068787 + Bilateria Bilateria No 1 1
Pca-Mir-22-P2 None MIR-22 AGCUGCC None None KQ715371.1 217647 217708 + Bilateria Bilateria No 1 1
Pdu-Mir-22-P2 None MIR-22 GUUCCUU None None JAPTHN010000002.1 75489904 75489964 - Bilateria Bilateria No 1
Pve-Mir-22-P2 None MIR-22 AGCUGCC None None Pve_Chr7 236402467 236402529 - Bilateria Bilateria No 1
Rph-Mir-22-P2 None MIR-22 AGCUGCC None None CM018526.1 21806394 21806455 + Bilateria Bilateria No 1
Snu-Mir-22-P2 None MIR-22 AGCUGCC None None CM049312.1 33087010 33087071 - Bilateria Bilateria No 1
Tur-Mir-22-P2 tur-mir-745 MIR-22 AGCUGCC MIMAT0023048 MIMAT0023049 HE587308.1 2281016 2281101 + Bilateria Bilateria No
War-Mir-22-P2 None MIR-22 AGCUGCC None None WNLI01171902.1 2586 2643 + Bilateria Bilateria Unknown 1
Cbr-Mir-22-P2 V cbr-mir-1822 MIR-22 AGCUGCC None MIMAT0011481 II 9704350 9704413 - Bilateria Bilateria 2 No
Tca-Mir-22-P2 V tca-mir-980 MIR-22 GGCUCGU MIMAT0018864 MIMAT0018865 KQ972119 1428 1488 + Bilateria Bilateria 2 No 1 1
Lpo-Mir-22-P2f None MIR-22 AGCUGCC None None NW_013670121.1 15031 15088 - L. polyphemus Bilateria No 1
Lpo-Mir-22-P2g None MIR-22 AGCUGCC None None NW_013668767.1 26063 26120 - L. polyphemus Bilateria No 1
Lpo-Mir-22-P2h None MIR-22 AGCUGCC None None NW_013666188.1 65508 65566 - L. polyphemus Bilateria No 1
Lpo-Mir-22-P2i None MIR-22 AGCUGCC None None NW_013666234.1 297414 297471 + L. polyphemus Bilateria No 1
Ofu-Mir-22-P2j None MIR-22 AGCUGCC None None CAIIXF020000012.1 1297053 1297111 - O. fusiformis Bilateria No
Ofu-Mir-22-P2k None MIR-22 AGCUGCC None None CAIIXF020000012.1 1297290 1297347 - O. fusiformis Bilateria No 1
Pcr-Mir-22-P2l None MIR-22 AGCUGCC None None CAJQUW010003990.1 30259 30318 + Bilateria Bilateria No 1
Pcr-Mir-22-P2m None MIR-22 AGCUGCC None None CAJQUW010003990.1 30453 30514 + Bilateria Bilateria No 1 1 1

(red - mature/co-mature, blue - star)

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