MirGeneDB 3.0
85 microRNA genes with seed GAGAACU
Sort by genome coordinates Motifs
MirGeneDB ID ▲ MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) Iso­miR 3' NTU  UG  UGUG CNNC
Ebu-Mir-146 None MIR-146 GAGAACU None None FYBX02010376.1 1384165 1384222 - Vertebrata Vertebrata Unknown 1 1
Pma-Mir-146 pma-mir-146 MIR-146 GAGAACU MIMAT0019478 MIMAT0019479 NC_046079.1 15291613 15291673 - Vertebrata Vertebrata Unknown 1
Aca-Mir-146-P1 aca-mir-146a MIR-146 GAGAACU MIMAT0021775 MIMAT0021776 3 39596510 39596569 + Gnathostomata Vertebrata No 1 1
Ami-Mir-146-P1 ami-mir-146b MIR-146 GAGAACU MIMAT0038172 MIMAT0038173 NW_017709336.1 14431087 14431146 - Gnathostomata Vertebrata No 1
Bta-Mir-146-P1 bta-mir-146b MIR-146 GAGAACU MIMAT0009235 None NC_037353.1 23057630 23057689 + Gnathostomata Vertebrata No 1 1
Cfa-Mir-146-P1 cfa-mir-146b MIR-146 GAGAACU MIMAT0006667 None chr28 14940550 14940609 + Gnathostomata Vertebrata No 1 1
Cja-Mir-146-P1 None MIR-146 GAGAACU None None CM021926.1 92089096 92089155 + Gnathostomata Vertebrata Unknown 1 1
Cli-Mir-146-P1 cli-mir-146b MIR-146 GAGAACU MIMAT0038537 MIMAT0038538 scaffold314 30548 30608 + Gnathostomata Vertebrata No 1 1
Cmi-Mir-146-P1 None MIR-146 GAGAACU None None KI636206.1 199369 199432 - Gnathostomata Vertebrata Unknown 1
Cpi-Mir-146-P1 cpi-mir-146b MIR-146 GAGAACU MIMAT0037776 MIMAT0037777 JH584751 734885 734944 + Gnathostomata Vertebrata No 1
Dno-Mir-146-P1 dno-mir-146b MIR-146 GAGAACU MIMAT0047665 MIMAT0047666 JH578031 588386 588445 - Gnathostomata Vertebrata No 1 1
Dre-Mir-146-P1 dre-mir-146a MIR-146 GAGAACU MIMAT0001843 None chr13 11822194 11822254 + Gnathostomata Vertebrata No 1 1 1
Eca-Mir-146-P1 eca-mir-146b MIR-146 GAGAACU MIMAT0012891 MIMAT0012892 CM009148.1 27882551 27882610 - Gnathostomata Vertebrata No 1 1
Ete-Mir-146-P1 None MIR-146 GAGAACU None None JH980301 26088336 26088395 - Gnathostomata Vertebrata No 1
Gga-Mir-146-P1 gga-mir-146b MIR-146 GAGAACU MIMAT0003351 MIMAT0003724 6 24096341 24096401 + Gnathostomata Vertebrata No 1 1
Gja-Mir-146-P1 None MIR-146 GAGAACU None None NW_015172003.1 221257 221316 + Gnathostomata Vertebrata Unknown 1 1 1
Gmo-Mir-146-P1 gmo-mir-146 MIR-146 GAGAACU MIMAT0044297 MIMAT0044298 GeneScaffold_4588 449897 449955 + Gnathostomata Vertebrata No
Hsa-Mir-146-P1 hsa-mir-146b MIR-146 GAGAACU MIMAT0002809 MIMAT0004766 chr10 102436520 102436578 + Gnathostomata Vertebrata No 1 1
Laf-Mir-146-P1 None MIR-146 GAGAACU None None GL010037.1 15910209 15910268 - Gnathostomata Vertebrata Unknown 1 1
Lch-Mir-146-P1 None MIR-146 GAGAACU None None BAHO01372914.1 4531 4595 - Gnathostomata Vertebrata Unknown 1
Loc-Mir-146-P1 None MIR-146 GAGAACU None None LG5 36680703 36680765 + Gnathostomata Vertebrata No 1
Mal-Mir-146-P1 None MIR-146 GAGAACU None None KV884740.1 518317 518378 + Gnathostomata Vertebrata No
Mdo-Mir-146-P1 mdo-mir-146b MIR-146 GAGAACU MIMAT0012747 MIMAT0026939 1 109630337 109630396 - Gnathostomata Vertebrata No
Mml-Mir-146-P1 mml-mir-146b MIR-146 GAGAACU MIMAT0006204 MIMAT0006205 CM014344.1 102960076 102960135 + Gnathostomata Vertebrata No 1 1
Mmr-Mir-146-P1 mmr-mir-146b MIR-146 GAGAACU MIMAT0049200 None CM007675.1 52000414 52000473 + Gnathostomata Vertebrata No 1
Mmu-Mir-146-P1 mmu-mir-146b MIR-146 GAGAACU MIMAT0003475 MIMAT0004826 chr19 46342790 46342849 + Gnathostomata Vertebrata No 1 1
Mun-Mir-146-P1 None MIR-146 GAGAACU None None LR594636.1 42038089 42038147 - Gnathostomata Vertebrata Unknown 1 1
Oan-Mir-146-P1 oan-mir-146b MIR-146 GAGAACU MIMAT0007007 MIMAT0007008 NC_041743.1 34965095 34965154 - Gnathostomata Vertebrata No
Ocu-Mir-146-P1 ocu-mir-146b MIR-146 GAGAACU MIMAT0048255 MIMAT0048256 chr18 50441898 50441957 + Gnathostomata Vertebrata Unknown 1 1
Pab-Mir-146-P1 None MIR-146 GAGAACU None None CM054687.2 109407192 109407251 + Gnathostomata Vertebrata No 1 1
Pbv-Mir-146-P1 pbv-mir-146a MIR-146 GAGAACU MIMAT0038961 None KE953034.1 15509 15569 + Gnathostomata Vertebrata Unknown 1 1
Rno-Mir-146-P1 rno-mir-146b MIR-146 GAGAACU MIMAT0005595 MIMAT0017334 chr1 266089502 266089561 + Gnathostomata Vertebrata No 1 1
Sha-Mir-146-P1 None MIR-146 GAGAACU None None GL834465.1 4322425 4322484 - Gnathostomata Vertebrata No
Spt-Mir-146-P1 None MIR-146 GAGAACU None None QEPC01008216.1 2285625 2285687 - Gnathostomata Vertebrata Unknown 1
Tgu-Mir-146-P1 tgu-mir-146b MIR-146 GAGAACU MIMAT0014602 MIMAT0014652 6 22361514 22361573 + Gnathostomata Vertebrata No 1 1
Tni-Mir-146-P1 None MIR-146 GAGAACU None None 17 4971502 4971563 + Gnathostomata Vertebrata No 1
Aca-Mir-146-P2 aca-mir-146b MIR-146 GAGAACU MIMAT0021777 MIMAT0021778 GL343301.1 1588682 1588746 + Gnathostomata Vertebrata Unknown 1
Ami-Mir-146-P2 ami-mir-146c MIR-146 GAGAACU MIMAT0038174 MIMAT0038175 NW_017712067.1 5690417 5690481 - Gnathostomata Vertebrata Unknown 1
Cli-Mir-146-P2 cli-mir-146c MIR-146 GAGAACU MIMAT0038539 MIMAT0038540 scaffold203 1412191 1412255 - Gnathostomata Vertebrata Yes 1
Cmi-Mir-146-P2 None MIR-146 GAGAACU None None KI635913.1 2268945 2269010 + Gnathostomata Vertebrata Yes 1
Cpi-Mir-146-P2 cpi-mir-146c MIR-146 GAGAACU MIMAT0037778 MIMAT0037779 JH584586 7426738 7426802 + Gnathostomata Vertebrata Yes 1
Gga-Mir-146-P2 gga-mir-146c MIR-146 GAGAACU None MIMAT0007736 4 88746723 88746787 - Gnathostomata Vertebrata Yes 1
Gja-Mir-146-P2 None MIR-146 GAGAACU None None NW_015169717.1 680 745 + Gnathostomata Vertebrata Unknown 1
Lch-Mir-146-P2 None MIR-146 GAGAACU None None JH126947.1 21211 21274 - Gnathostomata Vertebrata Unknown 1
Pbv-Mir-146-P2 pbv-mir-146b MIR-146 GAGAACU MIMAT0038962 None KE960809.1 20193 20257 - Gnathostomata Vertebrata Unknown 1
Spt-Mir-146-P2 None MIR-146 GAGAACU None None QEPC01005545.1 387339 387403 - Gnathostomata Vertebrata Unknown 1
Sto-Mir-146-P2 None MIR-146 GAGAACU None None BFAA01009135.1 120567 120631 + Gnathostomata Vertebrata Yes 1
Tgu-Mir-146-P2 tgu-mir-146a MIR-146 GAGAACU MIMAT0014622 MIMAT0014465 4 3170777 3170841 + Gnathostomata Vertebrata Yes 1
Xtr-Mir-146-P2 xtr-mir-146b MIR-146 GAGAACU MIMAT0005563 None chr1 8024093 8024157 + Gnathostomata Vertebrata Yes 1
Mun-Mir-146-P2 V None MIR-146 GAGAACU None None LR594633.1 465518696 465518760 + Gnathostomata Vertebrata 2 No 1
Xla-Mir-146-P2a None MIR-146 GAGAACU None None NC_030724.1 5138124 5138188 + X. laevis Vertebrata No 1
Xla-Mir-146-P2b xla-mir-146b MIR-146 GAGAACU MIMAT0046464 MIMAT0046465 NC_030725.1 4681358 4681419 - X. laevis Vertebrata No 1
Ami-Mir-146-P4 ami-mir-146a MIR-146 GAGAACU MIMAT0038171 None NW_017713851.1 11963153 11963215 - Gnathostomata Vertebrata Unknown 1 1
Cfa-Mir-146-P4 cfa-mir-146a MIR-146 GAGAACU MIMAT0006684 None chr4 50248598 50248654 - Gnathostomata Vertebrata No 1 1 1
Cja-Mir-146-P4 None MIR-146 GAGAACU None None CM021916.1 21401477 21401533 + Gnathostomata Vertebrata Unknown 1 1
Cli-Mir-146-P4 cli-mir-146a MIR-146 GAGAACU MIMAT0038535 MIMAT0038536 scaffold79 8894981 8895044 + Gnathostomata Vertebrata No 1 1
Cmi-Mir-146-P4 None MIR-146 GAGAACU None None KI635873.1 1678390 1678453 - Gnathostomata Vertebrata No 1
Cpi-Mir-146-P4 cpi-mir-146a MIR-146 GAGAACU MIMAT0037774 MIMAT0037775 JH584689 3139579 3139641 - Gnathostomata Vertebrata No 1 1
Cpo-Mir-146-P4 cpo-mir-146a MIR-146 GAGAACU MIMAT0047016 MIMAT0047017 scaffold_17 7375710 7375766 + Gnathostomata Vertebrata Unknown 1 1
Dno-Mir-146-P4 dno-mir-146a MIR-146 GAGAACU MIMAT0047663 MIMAT0047664 JH569702 597943 597999 - Gnathostomata Vertebrata No 1 1
Gga-Mir-146-P4 gga-mir-146a MIR-146 GAGAACU MIMAT0001163 MIMAT0026529 13 8517296 8517359 - Gnathostomata Vertebrata No 1 1
Hsa-Mir-146-P4 hsa-mir-146a MIR-146 GAGAACU MIMAT0000449 MIMAT0004608 chr5 160485372 160485428 + Gnathostomata Vertebrata No 1 1 1
Laf-Mir-146-P4 None MIR-146 GAGAACU None None GL010028.1 81796149 81796206 + Gnathostomata Vertebrata Unknown 1 1
Lch-Mir-146-P4 None MIR-146 GAGAACU None None JH127381.1 415415 415472 - Gnathostomata Vertebrata Unknown 1 1
Loc-Mir-146-P4 None MIR-146 GAGAACU None None LG6 20901651 20901709 + Gnathostomata Vertebrata No 1
Mdo-Mir-146-P4 mdo-mir-146a MIR-146 GAGAACU MIMAT0012746 MIMAT0026938 1 356034898 356034954 + Gnathostomata Vertebrata No 1 1
Mml-Mir-146-P4 mml-mir-146a MIR-146 GAGAACU MIMAT0006203 MIMAT0026824 CM014341.1 157877324 157877381 + Gnathostomata Vertebrata No 1 1 1
Mmr-Mir-146-P4 mmr-mir-146a MIR-146 GAGAACU MIMAT0049129 None CM007683.1 22147110 22147166 - Gnathostomata Vertebrata No 1 1 1
Mmu-Mir-146-P4 mmu-mir-146a MIR-146 GAGAACU MIMAT0000158 MIMAT0016989 chr11 43374399 43374456 - Gnathostomata Vertebrata No 1 1
Mun-Mir-146-P4 None MIR-146 GAGAACU None None LR594639.1 142550674 142550736 - Gnathostomata Vertebrata Unknown 1 1
Neu-Mir-146-P4 None MIR-146 GAGAACU None None CM051813.1 389831396 389831452 + Gnathostomata Vertebrata Unknown 1 1
Oan-Mir-146-P4 oan-mir-146a MIR-146 GAGAACU MIMAT0007230 MIMAT0007231 NC_041749.1 27130039 27130101 - Gnathostomata Vertebrata No 1
Ocu-Mir-146-P4 ocu-mir-146a MIR-146 GAGAACU MIMAT0048253 MIMAT0048254 chr3 41906611 41906668 + Gnathostomata Vertebrata Unknown 1 1 1
Pab-Mir-146-P4 None MIR-146 GAGAACU None None CM054683.2 169264655 169264711 + Gnathostomata Vertebrata Unknown 1 1 1
Rno-Mir-146-P4 rno-mir-146a MIR-146 GAGAACU MIMAT0000852 MIMAT0017132 chr10 28962498 28962554 - Gnathostomata Vertebrata No 1 1
Sha-Mir-146-P4 None MIR-146 GAGAACU None None GL834610.1 730365 730421 + Gnathostomata Vertebrata Unknown 1 1
Spt-Mir-146-P4 None MIR-146 GAGAACU None None QEPC01004083.1 20943 21005 - Gnathostomata Vertebrata Unknown 1
Sto-Mir-146-P4 None MIR-146 GAGAACU None None BFAA01000071.1 1362635 1362698 + Gnathostomata Vertebrata Unknown
Tgu-Mir-146-P4 tgu-mir-146c MIR-146 GAGAACU MIMAT0014609 None 13 2361944 2362007 + Gnathostomata Vertebrata No 1
Xla-Mir-146-P4 xla-mir-146a MIR-146 GAGAACU MIMAT0046462 MIMAT0046463 NC_030728.1 19665733 19665788 + Gnathostomata Vertebrata Unknown 1 1
Xtr-Mir-146-P4 xtr-mir-146a MIR-146 GAGAACU MIMAT0003604 None chr3 14163632 14163687 + Gnathostomata Vertebrata Unknown 1 1
Bta-Mir-146-P4 V bta-mir-146a MIR-146 GAGAACU MIMAT0009236 None NC_037334.1 72071568 72071625 + Gnathostomata Vertebrata 2 No 1 1 1
Dre-Mir-146-P4 V dre-mir-146b MIR-146 GAGAACU MIMAT0001844 None chr21 41639990 41640048 + Gnathostomata Vertebrata 2 No 1 1
Eca-Mir-146-P4 V eca-mir-146a MIR-146 GAGAACU MIMAT0013065 None CM009161.1 18375050 18375107 - Gnathostomata Vertebrata 2 Unknown 1 1 1
Hvu-Novel-8 None HVU-NOVEL-8 GAGAACU None None Sc4wPfr_341 579915 579966 + H. vulgaris H. vulgaris No

(red - mature/co-mature, blue - star)

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