MirGeneDB 2.1
MirGeneDB ID

Cli-Mir-146-P1

Family name MIR-146 (all species)
Seed GAGAACU
Species Rock pigeon (Columba livia)
MiRBase ID cli-mir-146b
Paralogues Cli-Mir-146-P2  Cli-Mir-146-P4 
Orthologues Aca-Mir-146-P1  Ami-Mir-146-P1  Bta-Mir-146-P1  Cfa-Mir-146-P1  Cmi-Mir-146-P1  Cpi-Mir-146-P1  Cpo-Mir-146-P1  Dno-Mir-146-P1  Dre-Mir-146-P1  Ebu-Mir-146  Ete-Mir-146-P1  Gga-Mir-146-P1  Gja-Mir-146-P1  Gmo-Mir-146-P1  Hsa-Mir-146-P1  Lch-Mir-146-P1  Loc-Mir-146-P1  Mal-Mir-146-P1  Mdo-Mir-146-P1  Mml-Mir-146-P1  Mmu-Mir-146-P1  Mun-Mir-146-P1  Oan-Mir-146-P1  Ocu-Mir-146-P1  Pbv-Mir-146-P1  Pma-Mir-146  Rno-Mir-146-P1  Sha-Mir-146-P1  Spt-Mir-146-P1  Tgu-Mir-146-P1  Tni-Mir-146-P1 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(colLiv2)		 scaffold314: 30548-30608 [+]
Precursor
(pre-Mir +30nt flank)
GGAAGCUGACUCGCACUGGCUACUUGGCUCUGAGAACUGAAUUCCAUAGGCAUUAAAGCCUCUAAAAAUGCCCUAUGGAUUCAGUUCUGCAGCUGGGCAGCAAAUGAGCCUCAAACCUUCA
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Structure
        10          20        30        40        50         60
GGAAGCUGACUCGCACUG--|  A  UG   CUG          U       -    AAAGC 
                    GCU CU  GCU   AGAACUGAAU CCAUAGG CAUU     C
                    CGA GG  CGA   UCUUGACUUA GGUAUCC GUAA     U
ACUUCCAAACUCCGAGUAAA^  C  GU   CG-          -       C    AAAUC 
 .       110       100        90         80         70
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
-   +
Cl Cl Cl Cl Cl To
Mature sequence

Cli-Mir-146-P1_5p
mirBase accessionMIMAT0038537
Sequence 
0- UGAGAACUGAAUUCCAUAGGCAUU -24
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Star sequence

Cli-Mir-146-P1_3p*
mirBase accessionMIMAT0038538
Sequence 
38- UGCCCUAUGGAUUCAGUUCUGCA -61
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