MirGeneDB 3.0
MirGeneDB ID

Cpo-Mir-146-P1

Family name MIR-146 (all species)
Species Guinea pig (Cavia porcellus)
MiRBase ID cpo-mir-146b
Paralogues Cpo-Mir-146-P4 
Orthologues Aca-Mir-146-P1  Ami-Mir-146-P1  Bta-Mir-146-P1  Cfa-Mir-146-P1  Cja-Mir-146-P1  Cli-Mir-146-P1  Cmi-Mir-146-P1  Cpi-Mir-146-P1  Dno-Mir-146-P1  Dre-Mir-146-P1  Ebu-Mir-146  Eca-Mir-146-P1  Ete-Mir-146-P1  Gga-Mir-146-P1  Gja-Mir-146-P1  Gmo-Mir-146-P1  Hsa-Mir-146-P1  Laf-Mir-146-P1  Lch-Mir-146-P1  Loc-Mir-146-P1  Mal-Mir-146-P1  Mdo-Mir-146-P1  Mml-Mir-146-P1  Mmr-Mir-146-P1  Mmu-Mir-146-P1  Mun-Mir-146-P1  Oan-Mir-146-P1  Ocu-Mir-146-P1  Pab-Mir-146-P1  Pbv-Mir-146-P1  Pma-Mir-146  Rno-Mir-146-P1  Sha-Mir-146-P1  Spt-Mir-146-P1  Tgu-Mir-146-P1  Tni-Mir-146-P1 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(cavPor3)		 scaffold_11: 12137383-12137442 [-] UCSC
Seed AAGAACU
Precursor
(pre-Mir +30nt flank)		 
UGUACUGAGAACGACCUGGCCAUCUGGCUUUAAGAACUGAAUUCUGUAGGCUGUGAGCUCCAGCAAAUGCCUUAGGGACUCAGUUCUGGAAACCUGGCUGUGCUGCACCCAGUUUCCAGG
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Structure
        10            20        30        40        50          
UGUACUGAGAACGACCU----|    UCU  C   A        A    GU    UGUGAGCU 
                     GGCCA   GG UUU AGAACUGA UUCU  AGGC        \
                     UCGGU   CC AAG UCUUGACU AGGG  UCCG        C
GGACCUUUGACCCACGUCGUG^    ---  A   G        C    AU    UAAACGAC 
.       110       100           90        80        70
Deep sequencing
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3' NTU Unknown
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
- +
Bl Bl Bl Bl Oo Oo Oo Oo To Wh
Mature sequence

Cpo-Mir-146-P1_5p
mirBase accessionMIMAT0047018
Sequence 
0- UAAGAACUGAAUUCUGUAGGCUG -23
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Star sequence

Cpo-Mir-146-P1_3p* (predicted)
mirBase accessionMIMAT0047019
Sequence 
38- GCCUUAGGGACUCAGUUCUGGA -60
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