MirGeneDB 2.1

MirGeneDB ID

Mml-Mir-146-P1

Family name MIR-146 (all species)
Seed GAGAACU
Species Rhesus monkey (Macaca mulatta)
MiRBase ID mml-mir-146b
Paralogues Mml-Mir-146-P4 
Orthologues Aca-Mir-146-P1  Ami-Mir-146-P1  Bta-Mir-146-P1  Cfa-Mir-146-P1  Cli-Mir-146-P1  Cmi-Mir-146-P1  Cpi-Mir-146-P1  Cpo-Mir-146-P1  Dno-Mir-146-P1  Dre-Mir-146-P1  Ebu-Mir-146  Ete-Mir-146-P1  Gga-Mir-146-P1  Gja-Mir-146-P1  Gmo-Mir-146-P1  Hsa-Mir-146-P1  Lch-Mir-146-P1  Loc-Mir-146-P1  Mal-Mir-146-P1  Mdo-Mir-146-P1  Mmu-Mir-146-P1  Mun-Mir-146-P1  Oan-Mir-146-P1  Ocu-Mir-146-P1  Pbv-Mir-146-P1  Pma-Mir-146  Rno-Mir-146-P1  Sha-Mir-146-P1  Spt-Mir-146-P1  Tgu-Mir-146-P1  Tni-Mir-146-P1 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(rheMac8_trace)
chr9: 98154429-98154488 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CAGGCUGAAAGAACUUUGGCCACCUGGCACUGAGAACUGAAUUCCAUAGGCUGUGAGCUCUAGCAAAUGCCCUAUGGACUCAGUUCUGGUGCCCGGCAGUGCUACACCAUCAAUUCCAAG
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Structure
        10             20        30        40        50        60
CAGGCUGAAAGAACUUUG-----|  ACCU      G        AU        CU  GAGCU 
                       GCC    GGCACU AGAACUGA  UCCAUAGG  GU     C
                       CGG    CCGUGG UCUUGACU  AGGUAUCC  UA     U
GAACCUUAACUACCACAUCGUGA^  C---      -        C-        CG  AACGA 
.       110       100           90         80         70
Deep sequencing
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CommentThere is a second Dicer cut -1 on the 3p arm.
3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
 +
Bo Br Br Br He Ki Li Lu Ly Sk Sp Te Th
Mature sequence

Mml-Mir-146-P1_5p

mirBase accessionMIMAT0006204
Sequence
0- UGAGAACUGAAUUCCAUAGGCUGU -24
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Proposed targets TargetScanVert: mml-miR-146b-5p
Star sequence

Mml-Mir-146-P1_3p*

mirBase accessionMIMAT0006205
Sequence
38- GCCCUAUGGACUCAGUUCUGGU -60
Get sequence
Proposed targets TargetScanVert: mml-miR-146b-3p