MirGeneDB 2.1
MirGeneDB ID

Dre-Mir-146-P1

Family name MIR-146 (all species)
Seed GAGAACU
Species Zebrafish (Danio rerio)
MiRBase ID dre-mir-146a
Paralogues Dre-Mir-146-P4-v1  Dre-Mir-146-P4-v2 
Orthologues Aca-Mir-146-P1  Ami-Mir-146-P1  Bta-Mir-146-P1  Cfa-Mir-146-P1  Cli-Mir-146-P1  Cmi-Mir-146-P1  Cpi-Mir-146-P1  Cpo-Mir-146-P1  Dno-Mir-146-P1  Ebu-Mir-146  Ete-Mir-146-P1  Gga-Mir-146-P1  Gja-Mir-146-P1  Gmo-Mir-146-P1  Hsa-Mir-146-P1  Lch-Mir-146-P1  Loc-Mir-146-P1  Mal-Mir-146-P1  Mdo-Mir-146-P1  Mml-Mir-146-P1  Mmu-Mir-146-P1  Mun-Mir-146-P1  Oan-Mir-146-P1  Ocu-Mir-146-P1  Pbv-Mir-146-P1  Pma-Mir-146  Rno-Mir-146-P1  Sha-Mir-146-P1  Spt-Mir-146-P1  Tgu-Mir-146-P1  Tni-Mir-146-P1 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(danRer11)		 chr13: 11822194-11822254 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GUGGCUGAGUUUGUUUUGAGCACUUUUCCCUGAGAACUGAAUUCCAUAGAUGGUGUUCAUGAAAAGUUCAUCUAUGGGCUCAGUUCUUCUGGCAAUCUGUUUAAUGUCUGCUACAAAUUCU
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Structure
        10          20        30        40        50        60
GUGGCUGAGUUUGUUUU--|    CU  U  CU         AU           UGUUCA 
                   GAGCA  UU CC  GAGAACUGA  UCCAUAGAUGG      U
                   UUUGU  AA GG  UUCUUGACU  GGGUAUCUACU      G
UCUUAAACAUCGUCUGUAA^    CU  C  UC         C-           UGAAAA 
 .       110       100        90        80         70
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17), UGUG in loop
Tissue expression
-   +
Br Br Em Ey Gu Gu He Li Li Ov Te
Mature sequence

Dre-Mir-146-P1_5p
mirBase accessionMIMAT0001843
Sequence 
0- UGAGAACUGAAUUCCAUAGAUGG -23
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Proposed targets TargetScanFish: dre-miR-146a
Star sequence

Dre-Mir-146-P1_3p*
mirBase accessionNone
Sequence 
39- AUCUAUGGGCUCAGUUCUUCUG -61
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