| MirGeneDB ID | Lch-Mir-146-P2 |
|---|---|
| Family name | MIR-146 (all species) |
| Seed | GAGAACU |
| Species | Coelacanth (Latimeria chalumnae) |
| MiRBase ID | |
| Paralogues | Lch-Mir-146-P1 Lch-Mir-146-P4 |
| Orthologues | Aca-Mir-146-P2 Ami-Mir-146-P2 Cli-Mir-146-P2 Cmi-Mir-146-P2 Cpi-Mir-146-P2 Ebu-Mir-146 Gga-Mir-146-P2 Gja-Mir-146-P2 Mun-Mir-146-P2-v1 Mun-Mir-146-P2-v2 Pbv-Mir-146-P2 Pma-Mir-146 Spt-Mir-146-P2 Sto-Mir-146-P2 Tgu-Mir-146-P2 Xla-Mir-146-P2a Xla-Mir-146-P2b Xtr-Mir-146-P2 |
| Node of Origin (locus) | Gnathostomata |
| Node of Origin (family) | Vertebrata |
| Genome context (LatCha1_add) |
JH126947.1: 21211-21274 [-] Ensembl |
| Precursor (pre-Mir +30nt flank) | GACACAGUAAUUCCUUGCAGGUCCCGGCUCUGAGAACUGAAUUCCAUGGGCUGGUCCAAUCAGAACUCUUCAGUCCAUAGUAGUCAGUUCUCCAGCUUGGCUGCACUUUUCUUCAGGAGUGGGUGet precursor sequence |
| Structure | 10 20 30 40 50 60 GACACAGUAAUUCCUUGCA---| U C CU AUUCC GUCCAAUC GG CC GGCU GAGAACUGA AUGGGCUG \ UC GG UCGA CUCUUGACU UACCUGAC A UGGGUGAGGACUUCUUUUCACG^ - U C- GAUGA UUCUCAAG 120 110 100 90 80 70 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | CNNC at 3p(+17) |
| Mature sequence | Lch-Mir-146-P2_5p (predicted) |
| mirBase accession | None |
| Sequence |
0- UGAGAACUGAAUUCCAUGGGCUG -23
Get sequence
|
| Star sequence | Lch-Mir-146-P2_3p* (predicted) |
| mirBase accession | None |
| Sequence |
42- GUCCAUAGUAGUCAGUUCUCCA -64
Get sequence
|
