MirGeneDB 2.1
MirGeneDB ID

Cmi-Mir-146-P2

Family name MIR-146 (all species)
Seed GAGAACU
Species Australian ghostshark (Callorhinchus milii)
MiRBase ID
Paralogues Cmi-Mir-146-P1  Cmi-Mir-146-P4 
Orthologues Aca-Mir-146-P2  Ami-Mir-146-P2  Cli-Mir-146-P2  Cpi-Mir-146-P2  Ebu-Mir-146  Gga-Mir-146-P2  Gja-Mir-146-P2  Lch-Mir-146-P2  Mun-Mir-146-P2-v1  Mun-Mir-146-P2-v2  Pbv-Mir-146-P2  Pma-Mir-146  Spt-Mir-146-P2  Sto-Mir-146-P2  Tgu-Mir-146-P2  Xla-Mir-146-P2a  Xla-Mir-146-P2b  Xtr-Mir-146-P2 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(GCA_000165045.2_Callorhinchus_milii-6.1.3)		 KI635913.1: 2268945-2269010 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GAAGACGAUGGACUGUGGCAGCUCCAGCUGUGAGAACUGAAUUCCAUGGGCUGGUCACGCAGUUUUCUUCCUCAGUCCAUAGUAGUCAGUUCUUCCGUUUGGCUGCUUGAUUCUCCAGCAACUUGU
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Structure
        10           20        30        40        50        60   
GAAGACGAUGGACUGUG---|     CC   U UG        AUUCC       GGUCACGCAG 
                    GCAGCU  AGC G  AGAACUGA     AUGGGCU          \
                    CGUCGG  UUG C  UCUUGACU     UACCUGA          U
UGUUCAACGACCUCUUAGUU^     U-   - CU        GAUGA       CUCCUUCUUU 
    120       110       100          90        80        70
Deep sequencing
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3' NTU Yes
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Bl Br Ey Gi Gl He In Ki Li Mu Ov Pa Sk Sp Te Ut
Mature sequence

Cmi-Mir-146-P2_5p
mirBase accessionNone
Sequence 
0- UGAGAACUGAAUUCCAUGGGCU -22
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Star sequence

Cmi-Mir-146-P2_3p*
mirBase accessionNone
Sequence 
45- UCCAUAGUAGUCAGUUCUUCC -66
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