MirGeneDB 3.0
MirGeneDB ID

Cfa-Mir-146-P4

Family name MIR-146 (all species)
Species Dog (Canis familiaris)
MiRBase ID cfa-mir-146a
Paralogues Cfa-Mir-146-P1 
Orthologues Ami-Mir-146-P4  Bta-Mir-146-P4-v1  Cja-Mir-146-P4  Cli-Mir-146-P4  Cmi-Mir-146-P4  Cpi-Mir-146-P4  Cpo-Mir-146-P4  Dno-Mir-146-P4  Dre-Mir-146-P4-v1  Ebu-Mir-146  Eca-Mir-146-P4-v1  Gga-Mir-146-P4  Hsa-Mir-146-P4  Laf-Mir-146-P4  Lch-Mir-146-P4  Loc-Mir-146-P4  Mdo-Mir-146-P4  Mml-Mir-146-P4  Mmr-Mir-146-P4  Mmu-Mir-146-P4  Mun-Mir-146-P4  Neu-Mir-146-P4  Oan-Mir-146-P4  Ocu-Mir-146-P4  Pab-Mir-146-P4  Pma-Mir-146  Rno-Mir-146-P4  Sha-Mir-146-P4  Spt-Mir-146-P4  Sto-Mir-146-P4  Tgu-Mir-146-P4  Xla-Mir-146-P4  Xtr-Mir-146-P4 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(canFam3_add)		 chr4: 50248598-50248654 [-] UCSC Ensembl
Seed GAGAACU
Precursor
(pre-Mir +30nt flank)		 
CUCCAGAAGGCUGGUGUGUAUCCUCAGCUUUGAGAACUGAAUUCCAUGGGUUGUGUCAGUGUCAGACCUGUGAAGUUCAGUUCUUCAGCUGGGAUAUCUCUGUCGUCGUGGAUUCAG
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Structure
        10           20        30        40        50        
CUCCAGAAGGCUGGUGU---|     U     UU            C        GUGUC 
                    GUAUCC CAGCU  GAGAACUGAAUU CAUGGGUU     A
                    UAUAGG GUCGA  UUCUUGACUUGA GUGUCCAG     G
GACUUAGGUGCUGCUGUCUC^     -     C-            A        ACUGU 
     110       100         90         80        70        60
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17), UGUG in loop
Tissue expression
- +
An An An Bl Ce Co He Hi Hi Hy Ki Ki Li Lu Ov Sk Te Te
Mature sequence

Cfa-Mir-146-P4_5p
mirBase accessionMIMAT0006684
Sequence 
0- UGAGAACUGAAUUCCAUGGGUUG -23
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Proposed targets TargetScanVert: cfa-miR-146a
miRDB: MIMAT0006684
Star sequence

Cfa-Mir-146-P4_3p*
mirBase accessionNone
Sequence 
35- ACCUGUGAAGUUCAGUUCUUCA -57
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