MirGeneDB 3.0
MirGeneDB ID

Tgu-Mir-210

Family name MIR-210 (all species)
Species Zebra finch (Taeniopygia guttata)
MiRBase ID
Paralogues
Orthologues Aae-Mir-210-v1  Aca-Mir-210  Aga-Mir-210-v1  Agr-Mir-210  Ami-Mir-210  Bfl-Mir-210  Bge-Mir-210-v1  Bla-Mir-210  Bta-Mir-210  Cfa-Mir-210  Cja-Mir-210  Cli-Mir-210  Cmi-Mir-210  Cpi-Mir-210  Cpo-Mir-210  Csc-Mir-210-P13a  Csc-Mir-210-P13b  Csc-Mir-210-P14  Cte-Mir-210-P6  Cte-Mir-210-P7  Dan-Mir-210-v1  Dgr-Mir-210  Dlo-Mir-210-v1  Dma-Mir-210  Dme-Mir-210-v1  Dmo-Mir-210-v1  Dno-Mir-210  Dpu-Mir-210  Dre-Mir-210  Dsi-Mir-210-v1  Dya-Mir-210-v1  Eba-Mir-210  Ebu-Mir-210  Eca-Mir-210  Efe-Mir-210-P6  Egr-Mir-210  Esc-Mir-210-P15-v1  Esc-Mir-210-P16  Ete-Mir-210  Gga-Mir-210  Gja-Mir-210  Gmo-Mir-210  Gpa-Mir-210-v1  Hme-Mir-210-P3  Hme-Mir-210-P4  Hru-Mir-210-P23  Hru-Mir-210-P24  Hsa-Mir-210  Isc-Mir-210  Lan-Mir-210  Lch-Mir-210  Lgi-Mir-210  Lhy-Mir-210  Llo-Mir-210  Loc-Mir-210  Lpo-Mir-210-P8  Lpo-Mir-210-P9  Lpo-Mir-210-P10  Lpo-Mir-210-P11  Lpo-Mir-210-P12  Mal-Mir-210  Mdo-Mir-210  Mgi-Mir-210  Mml-Mir-210  Mmr-Mir-210  Mmu-Mir-210  Mom-Mir-210  Mun-Mir-210  Neu-Mir-210  Npo-Mir-210  Oan-Mir-210  Obi-Mir-210-P15-v1  Obi-Mir-210-P16  Ocu-Mir-210  Ofu-Mir-210  Ovu-Mir-210-P15-v1  Ovu-Mir-210-P16  Pab-Mir-210  Pau-Mir-210  Pbv-Mir-210  Pca-Mir-210  Pcr-Mir-210-P26  Pcr-Mir-210-P27  Pcr-Mir-210-P28  Pdu-Mir-210-P5  Pdu-Mir-210-P6  Pdu-Mir-210-P7  Pfl-Mir-210-P25a  Pfl-Mir-210-P25b  Pma-Mir-210  Pmi-Mir-210-v1  Rno-Mir-210  Sha-Mir-210  Sko-Mir-210  Sma-Mir-210  Sme-Mir-210-P17  Sme-Mir-210-P18  Snu-Mir-210  Spt-Mir-210  Spu-Mir-210-v1  Sto-Mir-210-P1  Sto-Mir-210-P2  Tca-Mir-210-v1  Tni-Mir-210  Tur-Mir-210-P21  Tur-Mir-210-P22  War-Mir-210  Xbo-Mir-210-P19  Xbo-Mir-210-P20  Xla-Mir-210-P21  Xla-Mir-210-P22  Xtr-Mir-210 
Node of Origin (locus) Bilateria
Node of Origin (family) Bilateria
Genome context
(TaeGut1_add)		 5: 17364921-17364981 [+] UCSC Ensembl
Seed UGUGCGU
Precursor
(pre-Mir +30nt flank)		 
CGCCCCCCCGUCACCCUCCAGGAGCAGGUGAGCCACUGACUAACGCACAUUGUGCUCUCGGCGACUCCACUGUGCGUGUGACAGCGGCUAACCUGCUCCUCGGACAUCACUGUGCGGCCGC
Get precursor sequence
Structure
        10          20        30        40        50          
CGCCCCCCCGUCACCCU-  -|         G    A   ACUA       U  UGCUCUC 
                  CC AGGAGCAGGU AGCC CUG    ACGCACA UG       \
                  GG UCCUCGUCCA UCGG GAC    UGCGUGU AC       G
CGCCGGCGUGUCACUACA  C^         A    C   AGUG       C  CUCAGCG 
 .       110       100        90        80        70
Deep sequencing
Go to detailed chart
CommentNot in assembly but in trace archives. There is a second Drosha cut -1 on the 5p arm.
3' NTU No
MotifsNo
Tissue expression
- +
Fe Fe Fe Fe Ma Ma Ma Ma
Star sequence

Tgu-Mir-210_5p*
mirBase accessionNone
Sequence 
0- AGCCACUGACUAACGCACAUUG -22
Get sequence
Mature sequence

Tgu-Mir-210_3p
mirBase accessionNone
Sequence 
39- CUGUGCGUGUGACAGCGGCUAA -61
Get sequence