MirGeneDB 3.0
MirGeneDB ID

Dme-Mir-210

Family name MIR-210 (all species)
Species Fruit fly (Drosophila melanogaster)
MiRBase ID dme-mir-210
Paralogues
Orthologues Aae-Mir-210-v1  Aca-Mir-210  Aga-Mir-210-v1  Agr-Mir-210  Ami-Mir-210  Bfl-Mir-210  Bge-Mir-210-v1  Bla-Mir-210  Bta-Mir-210  Cfa-Mir-210  Cja-Mir-210  Cli-Mir-210  Cmi-Mir-210  Cpi-Mir-210  Cpo-Mir-210  Dan-Mir-210-v1  Dgr-Mir-210  Dlo-Mir-210-v1  Dma-Mir-210  Dmo-Mir-210-v1  Dno-Mir-210  Dpu-Mir-210  Dre-Mir-210  Dsi-Mir-210-v1  Dya-Mir-210-v1  Eba-Mir-210  Ebu-Mir-210  Eca-Mir-210  Egr-Mir-210  Ete-Mir-210  Gga-Mir-210  Gja-Mir-210  Gmo-Mir-210  Gpa-Mir-210-v1  Hsa-Mir-210  Isc-Mir-210  Lan-Mir-210  Lch-Mir-210  Lgi-Mir-210  Lhy-Mir-210  Llo-Mir-210  Loc-Mir-210  Mal-Mir-210  Mdo-Mir-210  Mgi-Mir-210  Mml-Mir-210  Mmr-Mir-210  Mmu-Mir-210  Mom-Mir-210  Mun-Mir-210  Neu-Mir-210  Npo-Mir-210  Oan-Mir-210  Ocu-Mir-210  Ofu-Mir-210  Pab-Mir-210  Pau-Mir-210  Pbv-Mir-210  Pca-Mir-210  Pma-Mir-210  Pmi-Mir-210-v1  Rno-Mir-210  Sha-Mir-210  Sko-Mir-210  Sma-Mir-210  Snu-Mir-210  Spt-Mir-210  Spu-Mir-210-v1  Tca-Mir-210-v1  Tgu-Mir-210  Tni-Mir-210  War-Mir-210  Xtr-Mir-210 
Node of Origin (locus) Bilateria
Node of Origin (family) Bilateria
Genome context
(Drosophila_melanogaster_BDGP6)		 X: 18128234-18128292 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-210-v1)		 Mir-969 X: 18124375-18124436 [+] UCSC Ensembl
Mir-210-v1 X: 18128234-18128292 [+] UCSC Ensembl
Mir-210-v2 X: 18128234-18128292 [+] UCSC Ensembl
Variant

Dme-Mir-210-v1
Seed UGUGCGU
Precursor
(pre-Mir +30nt flank)		 
CCACGUCCGGAACCGAAAGGUGCUUAUUGCAGCUGCUGGCCACUGCACAAGAUUAGACUUAAGACUCUUGUGCGUGUGACAGCGGCUAUUGUAAGAGGCCAUAGAAGCAACAGCCAGCC
Get precursor sequence
Structure
        10         20         30        40         50         
CCACGUCCGGAACCGAAA-   G-|    UGC        GC   -         UUAGAC 
                   GGU  CUUAU   AGCUGCUG  CAC UGCACAAGA      \
                   CCG  GAAUG   UCGGCGAC  GUG GCGUGUUCU      U
CCGACCGACAACGAAGAUA   GA^    UUA        A-   U         CAGAAU 
       110       100        90        80         70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsNo
Tissue expression
- +
Bo He He La Ov Sa Wh
Star sequence

Dme-Mir-210-v1_5p*
mirBase accessionMIMAT0020816
Sequence 
0- AGCUGCUGGCCACUGCACAAGA -22
Get sequence
Mature sequence

Dme-Mir-210-v1_3p
mirBase accessionMIMAT0000355
Sequence 
37- UUGUGCGUGUGACAGCGGCUAU -59
Get sequence
Proposed targets microrna.org: MIMAT0000355
Variant

Dme-Mir-210-v2
Seed UUGUGCG
Precursor
(pre-Mir +30nt flank)		 
CCACGUCCGGAACCGAAAGGUGCUUAUUGCAGCUGCUGGCCACUGCACAAGAUUAGACUUAAGACUCUUGUGCGUGUGACAGCGGCUAUUGUAAGAGGCCAUAGAAGCAACAGCCAGCC
Get precursor sequence
Structure
        10         20         30        40         50         
CCACGUCCGGAACCGAAA-   G-|    UGC        GC   -         UUAGAC 
                   GGU  CUUAU   AGCUGCUG  CAC UGCACAAGA      \
                   CCG  GAAUG   UCGGCGAC  GUG GCGUGUUCU      U
CCGACCGACAACGAAGAUA   GA^    UUA        A-   U         CAGAAU 
       110       100        90        80         70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsNo
Tissue expression
- +
Bo He He La Ov Sa Wh
Star sequence

Dme-Mir-210-v2_5p*
mirBase accessionMIMAT0020816
Sequence 
0- AGCUGCUGGCCACUGCACAAGAU -23
Get sequence
Mature sequence

Dme-Mir-210-v2_3p
mirBase accessionMIMAT0000355
Sequence 
36- CUUGUGCGUGUGACAGCGGCUAU -59
Get sequence
Proposed targets microrna.org: MIMAT0000355