MirGeneDB 2.1
MirGeneDB ID

Bfl-Mir-210

Family name MIR-210 (all species)
Seed UGUGCGU
Species Florida lancelet (Branchiostoma floridae)
MiRBase ID bfl-mir-210
Paralogues
Orthologues Aae-Mir-210-v1  Aae-Mir-210-v2  Aca-Mir-210  Ami-Mir-210  Bge-Mir-210-v1  Bge-Mir-210-v2  Bla-Mir-210  Bta-Mir-210  Cfa-Mir-210  Cgi-Mir-210  Cli-Mir-210  Cmi-Mir-210  Cpi-Mir-210  Cpo-Mir-210  Csc-Mir-210-P13a  Csc-Mir-210-P13b  Csc-Mir-210-P14  Cte-Mir-210-P5  Cte-Mir-210-P6  Dan-Mir-210-v1  Dan-Mir-210-v2  Dma-Mir-210  Dme-Mir-210-v1  Dme-Mir-210-v2  Dmo-Mir-210-v1  Dmo-Mir-210-v2  Dno-Mir-210  Dpu-Mir-210  Dre-Mir-210  Dsi-Mir-210-v1  Dsi-Mir-210-v2  Dya-Mir-210-v1  Dya-Mir-210-v2  Ebu-Mir-210  Efe-Mir-210  Esc-Mir-210-P15-v1  Esc-Mir-210-P15-v2  Esc-Mir-210-P16  Ete-Mir-210  Gga-Mir-210  Gja-Mir-210  Gmo-Mir-210  Hme-Mir-210-P3  Hme-Mir-210-P4  Hsa-Mir-210  Isc-Mir-210  Lan-Mir-210  Lch-Mir-210  Lgi-Mir-210  Loc-Mir-210  Lpo-Mir-210-P8  Lpo-Mir-210-P9  Lpo-Mir-210-P10  Lpo-Mir-210-P11  Lpo-Mir-210-P12  Mal-Mir-210  Mdo-Mir-210  Mml-Mir-210  Mmu-Mir-210  Mun-Mir-210  Npo-Mir-210  Oan-Mir-210  Obi-Mir-210-P15-v1  Obi-Mir-210-P15-v2  Obi-Mir-210-P16  Ocu-Mir-210  Ovu-Mir-210-P15-v1  Ovu-Mir-210-P15-v2  Ovu-Mir-210-P16  Pbv-Mir-210  Pfl-Mir-210-P7a  Pfl-Mir-210-P7b  Pma-Mir-210  Pmi-Mir-210-v1  Pmi-Mir-210-v2  Rno-Mir-210  Sha-Mir-210  Sko-Mir-210  Sme-Mir-210-P17  Sme-Mir-210-P18  Spt-Mir-210  Spu-Mir-210-v1  Spu-Mir-210-v2  Sto-Mir-210-P1  Sto-Mir-210-P2  Tca-Mir-210-v1  Tca-Mir-210-v2  Tgu-Mir-210  Tni-Mir-210  Xbo-Mir-210-P17  Xbo-Mir-210-P18  Xla-Mir-210-P13  Xla-Mir-210-P14  Xtr-Mir-210 
Node of Origin (locus) Bilateria
Node of Origin (family) Bilateria
Genome context
(GCF_000003815.2_Bfl_VNyyK_genomic)		 NC_049982.1: 18727157-18727219 [+] UCSC
Precursor
(pre-Mir +30nt flank)
GUGGUGUCCGCACAGUUGGUCGGUGGCAUUCGCCUCUGUUUCGCGCGCAAGAUGUGAUGUUAGUCCUGCUCCUGUGCGUGUGACAGCGGCUGAUGCACCGGCCAAAACGUCGUCGUUGGAACC
Get precursor sequence
Structure
        10           20        30        40        50        60 
GUGGUGUCCGCACAGUU---|       G    C   U     U        A  UGUGAUGU 
                    GGUCGGUG CAUU GCC CUGUU CGCGCGCA GA        \
                    CCGGCCAC GUAG CGG GACAG GUGCGUGU CU        U
CCAAGGUUGCUGCUGCAAAA^       -    U   C     U        C  CGUCCUGA 
 120       110       100         90        80        70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17), UGUG in loop
Tissue expression
-   +
To
Star sequence

Bfl-Mir-210_5p*
mirBase accessionMIMAT0019149
Sequence 
0- CGCCUCUGUUUCGCGCGCAAGA -22
Get sequence
Mature sequence

Bfl-Mir-210_3p
mirBase accessionMIMAT0009494
Sequence 
41- CUGUGCGUGUGACAGCGGCUGA -63
Get sequence