MirGeneDB 2.1

MirGeneDB ID

Cte-Mir-210-P6

Family name MIR-210 (all species)
Seed GGUCAUU
Species Polychaete worm (Capitella teleta)
MiRBase ID cte-mir-210a
Paralogues Cte-Mir-210-P5 
Orthologues Aca-Mir-210  Ami-Mir-210  Bfl-Mir-210  Bla-Mir-210  Bta-Mir-210  Cfa-Mir-210  Cgi-Mir-210  Cli-Mir-210  Cmi-Mir-210  Cpi-Mir-210  Cpo-Mir-210  Dma-Mir-210  Dno-Mir-210  Dpu-Mir-210  Dre-Mir-210  Ebu-Mir-210  Efe-Mir-210  Ete-Mir-210  Gga-Mir-210  Gja-Mir-210  Gmo-Mir-210  Hsa-Mir-210  Isc-Mir-210  Lan-Mir-210  Lch-Mir-210  Lgi-Mir-210  Loc-Mir-210  Mal-Mir-210  Mdo-Mir-210  Mml-Mir-210  Mmu-Mir-210  Mun-Mir-210  Npo-Mir-210  Oan-Mir-210  Ocu-Mir-210  Pbv-Mir-210  Pma-Mir-210  Rno-Mir-210  Sha-Mir-210  Sko-Mir-210  Spt-Mir-210  Tgu-Mir-210  Tni-Mir-210  Xtr-Mir-210 
Node of Origin (locus) C. teleta
Node of Origin (family) Bilateria
Genome context
(Capitella_teleta_v1.0)
CAPTEscaffold_591: 19538-19606 [-] Ensembl
Clustered miRNAs
(< 50kb from Mir-210-P6)
Mir-210-P6 CAPTEscaffold_591: 19538-19606 [-] Ensembl
Mir-210-P5 CAPTEscaffold_591: 25368-25430 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
UGAUAGCAUUAUAUGAGACGGCGUGUGCGUUGGUCAUUGCGCUACGCACAAAGAAGAUGCGCUGCUUGAUUUCACUUUGUGCGUGUGACAGUGACAAUGCACGCACGUCACUGCUUCGUCAUCGCCGUC
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Structure
        10         20        30          40        50        60    
UGAUAGCAUUAUAUGAGAC-        C  UG-       -|  U          AAGAUGCGCU 
                    GGCGUGUG GU   GUCAUUG CGC ACGCACAAAG          \
                    CUGCACGC CG   CAGUGAC GUG UGCGUGUUUC          G
CUGCCGCUACUGCUUCGUCA        A  UAA       A^  -          ACUUUAGUUC 
       120       110       100        90         80        70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
To
Mature sequence

Cte-Mir-210-P6_5p

mirBase accessionNone
Sequence
0- UGGUCAUUGCGCUACGCACAAAGA -24
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Co-mature sequence

Cte-Mir-210-P6_3p

mirBase accessionMIMAT0009534
Sequence
45- UUUGUGCGUGUGACAGUGACAAUG -69
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