MirGeneDB 3.0
MirGeneDB ID

Pdu-Mir-210-P6

Family name MIR-210 (all species)
Species Dumerils clam worm (Platynereis dumerilii)
MiRBase ID
Paralogues Pdu-Mir-210-P5  Pdu-Mir-210-P7 
Orthologues Aca-Mir-210  Agr-Mir-210  Ami-Mir-210  Bfl-Mir-210  Bla-Mir-210  Bta-Mir-210  Cfa-Mir-210  Cja-Mir-210  Cli-Mir-210  Cmi-Mir-210  Cpi-Mir-210  Cpo-Mir-210  Cte-Mir-210-P6  Dgr-Mir-210  Dma-Mir-210  Dno-Mir-210  Dpu-Mir-210  Dre-Mir-210  Eba-Mir-210  Ebu-Mir-210  Eca-Mir-210  Efe-Mir-210-P6  Egr-Mir-210  Ete-Mir-210  Gga-Mir-210  Gja-Mir-210  Gmo-Mir-210  Hsa-Mir-210  Isc-Mir-210  Lan-Mir-210  Lch-Mir-210  Lgi-Mir-210  Lhy-Mir-210  Llo-Mir-210  Loc-Mir-210  Mal-Mir-210  Mdo-Mir-210  Mgi-Mir-210  Mml-Mir-210  Mmr-Mir-210  Mmu-Mir-210  Mom-Mir-210  Mun-Mir-210  Neu-Mir-210  Npo-Mir-210  Oan-Mir-210  Ocu-Mir-210  Ofu-Mir-210  Pab-Mir-210  Pau-Mir-210  Pbv-Mir-210  Pca-Mir-210  Pma-Mir-210  Rno-Mir-210  Sha-Mir-210  Sko-Mir-210  Sma-Mir-210  Snu-Mir-210  Spt-Mir-210  Tgu-Mir-210  Tni-Mir-210  War-Mir-210  Xtr-Mir-210 
Node of Origin (locus) Pleistoannelida
Node of Origin (family) Bilateria
Genome context
(GCA_026936325.1_EMBL_pdum_1.0)		 JAPTHN010000010.1: 1593968-1594026 [-] Ensembl
Clustered miRNAs
(< 50kb from Mir-210-P6)		 Mir-210-P6 JAPTHN010000010.1: 1593968-1594026 [-] Ensembl
Mir-210-P5 JAPTHN010000010.1: 1599740-1599799 [-] Ensembl
Seed UGUGCGU
Precursor
(pre-Mir +30nt flank)		 
CAGUCGUCAAAACAGAGUGCGCAUCAGAGCCACCGUUGCUUCAUGCCCAGCGUUAAAUUCAAGUCGUUGUGCGUGGGACAGCGGCCCGCUCUGUGCGCAAAAGUUCAACAAAGACAACA
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Structure
        10           20        30         40        50        
CAGUCGUCAAAACAGAG---|     U      CA-      CU      C     UUAAA 
                    UGCGCA CAGAGC   CCGUUG  UCAUGC CAGCG     U
                    ACGCGU GUCUCG   GGCGAC  GGUGCG GUUGC     U
ACAACAGAAACAACUUGAAA^     -      CCC      AG      U     UGAAC 
       110       100         90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
24 24 24 24 24 36 36 36 36 36 48 48 48 48 48 6d 6d 6d 6d 72 72 72 72 72
Star sequence

Pdu-Mir-210-P6_5p*
mirBase accessionNone
Sequence 
0- CACCGUUGCUUCAUGCCCAGCG -22
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Mature sequence

Pdu-Mir-210-P6_3p
mirBase accessionNone
Sequence 
36- UUGUGCGUGGGACAGCGGCCCGC -59
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