MirGeneDB 3.0
MirGeneDB ID

Lpo-Mir-210-P10

Family name MIR-210 (all species)
Species Atlantic horseshoe crab (Limulus polyphemus)
MiRBase ID
Paralogues Lpo-Mir-210-P8  Lpo-Mir-210-P9  Lpo-Mir-210-P11  Lpo-Mir-210-P12 
Orthologues Aca-Mir-210  Agr-Mir-210  Ami-Mir-210  Bfl-Mir-210  Bla-Mir-210  Bta-Mir-210  Cfa-Mir-210  Cja-Mir-210  Cli-Mir-210  Cmi-Mir-210  Cpi-Mir-210  Cpo-Mir-210  Dgr-Mir-210  Dma-Mir-210  Dno-Mir-210  Dpu-Mir-210  Dre-Mir-210  Eba-Mir-210  Ebu-Mir-210  Eca-Mir-210  Egr-Mir-210  Ete-Mir-210  Gga-Mir-210  Gja-Mir-210  Gmo-Mir-210  Hsa-Mir-210  Isc-Mir-210  Lan-Mir-210  Lch-Mir-210  Lgi-Mir-210  Lhy-Mir-210  Llo-Mir-210  Loc-Mir-210  Mal-Mir-210  Mdo-Mir-210  Mgi-Mir-210  Mml-Mir-210  Mmr-Mir-210  Mmu-Mir-210  Mom-Mir-210  Mun-Mir-210  Neu-Mir-210  Npo-Mir-210  Oan-Mir-210  Ocu-Mir-210  Ofu-Mir-210  Pab-Mir-210  Pau-Mir-210  Pbv-Mir-210  Pca-Mir-210  Pma-Mir-210  Rno-Mir-210  Sha-Mir-210  Sko-Mir-210  Sma-Mir-210  Snu-Mir-210  Spt-Mir-210  Tgu-Mir-210  Tni-Mir-210  War-Mir-210  Xtr-Mir-210 
Node of Origin (locus) L. polyphemus
Node of Origin (family) Bilateria
Genome context
(GCF_000517525.1_Limulus_polyphemus-2.1.2_genomic)		 NW_013666046.1: 174615-174674 [-] Ensembl
Seed UGUGCGU
Precursor
(pre-Mir +30nt flank)		 
CUAGUGACGCUUUGGAAAGGCGUUUACAGUAGUUGCUGAACAUGACACGAGACUAGGUUUGAGUCCUCUUGUGCGUGUGACAGCGGCUAUCGUAAUGCGCUAAAGGUUCAUCCAGAAGAU
Get precursor sequence
Structure
        10         20         30         40        50         
CUAGUGACGCUUUGGAAA-     -    A          A-|    A       CUAGGU 
                   GGCGU UUAC GUAGUUGCUG  ACAUG CACGAGA      U
                   UCGCG AAUG UAUCGGCGAC  UGUGC GUGUUCU      U
UAGAAGACCUACUUGGAAA     U    C          AG^    -       CCUGAG 
.       110       100        90        80         70        60
Deep sequencing
Go to detailed chart
CommentThere is a second Drosha cut -1 on the 5p arm.
3' NTU No
MotifsNo
Tissue expression
- +
Ge Ge So So So To
Star sequence

Lpo-Mir-210-P10_5p*
mirBase accessionNone
Sequence 
0- AGUUGCUGAACAUGACACGAGA -22
Get sequence
Mature sequence

Lpo-Mir-210-P10_3p
mirBase accessionNone
Sequence 
38- UUGUGCGUGUGACAGCGGCUAU -60
Get sequence