MirGeneDB 2.1

MirGeneDB ID

Csc-Mir-210-P13a

Family name MIR-210 (all species)
Seed UGUGCGU
Species Arizona bark scorpion (Centruroides sculpturatus)
MiRBase ID
Paralogues Csc-Mir-210-P13b  Csc-Mir-210-P14 
Orthologues Aca-Mir-210  Ami-Mir-210  Bfl-Mir-210  Bla-Mir-210  Bta-Mir-210  Cfa-Mir-210  Cgi-Mir-210  Cli-Mir-210  Cmi-Mir-210  Cpi-Mir-210  Cpo-Mir-210  Dma-Mir-210  Dno-Mir-210  Dpu-Mir-210  Dre-Mir-210  Ebu-Mir-210  Efe-Mir-210  Ete-Mir-210  Gga-Mir-210  Gja-Mir-210  Gmo-Mir-210  Hsa-Mir-210  Isc-Mir-210  Lan-Mir-210  Lch-Mir-210  Lgi-Mir-210  Loc-Mir-210  Mal-Mir-210  Mdo-Mir-210  Mml-Mir-210  Mmu-Mir-210  Mun-Mir-210  Npo-Mir-210  Oan-Mir-210  Ocu-Mir-210  Pbv-Mir-210  Pma-Mir-210  Rno-Mir-210  Sha-Mir-210  Sko-Mir-210  Spt-Mir-210  Tgu-Mir-210  Tni-Mir-210  Xla-Mir-210-P13  Xtr-Mir-210 
Node of Origin (locus) C. sculpturatus
Node of Origin (family) Bilateria
Genome context
(GCF_000671375.1_CSC)
NW_019384588.1: 118811-118876 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
AAAAUAAAAUAAAAUCUAGGCGUUCACCCCAGUCGCUGUGCUGCGUGCAAGAUGUGAAUUUUUAAAACUUAUCUUGUGCGUGUGACAGCGGCUAUUGUGUUACGUCACGAGUCUUCGAAUAUCAAG
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Structure
        10          20         30         40        50        60  
AAAAUAAAAUAAAAUCUA--     U-   CCC         -| U   UG     UGUGAAUUU 
                    GGCGU  CAC   AGUCGCUGU GC GCG  CAAGA         \
                    CUGCA  GUG   UCGGCGACA UG UGC  GUUCU         U
GAACUAUAAGCUUCUGAGCA     UU   UUA         G^ -   GU     AUUCAAAAU 
    120       110       100        90         80        70
Deep sequencing
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3' NTU Unknown
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
 +
Fe Fe Fe Fe Ma Ma Ma
Star sequence

Csc-Mir-210-P13a_5p*

mirBase accessionNone
Sequence
0- AGUCGCUGUGCUGCGUGCAAGA -22
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Mature sequence

Csc-Mir-210-P13a_3p

mirBase accessionNone
Sequence
43- UUGUGCGUGUGACAGCGGCUAUU -66
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