Mir-210-P14

MirGeneDB ID

Csc-Mir-210-P14

Family name

MIR-210 (all species)

Species

Arizona bark scorpion (Centruroides sculpturatus)

MiRBase ID

Paralogues

Csc-Mir-210-P13a Csc-Mir-210-P13b

Orthologues

Aca-Mir-210 Agr-Mir-210 Ami-Mir-210 Bfl-Mir-210 Bla-Mir-210 Bta-Mir-210 Cfa-Mir-210 Cja-Mir-210 Cli-Mir-210 Cmi-Mir-210 Cpi-Mir-210 Cpo-Mir-210 Dgr-Mir-210 Dma-Mir-210 Dno-Mir-210 Dpu-Mir-210 Dre-Mir-210 Eba-Mir-210 Ebu-Mir-210 Eca-Mir-210 Egr-Mir-210 Ete-Mir-210 Gga-Mir-210 Gja-Mir-210 Gmo-Mir-210 Hsa-Mir-210 Isc-Mir-210 Lan-Mir-210 Lch-Mir-210 Lgi-Mir-210 Lhy-Mir-210 Llo-Mir-210 Loc-Mir-210 Mal-Mir-210 Mdo-Mir-210 Mgi-Mir-210 Mml-Mir-210 Mmr-Mir-210 Mmu-Mir-210 Mom-Mir-210 Mun-Mir-210 Neu-Mir-210 Npo-Mir-210 Oan-Mir-210 Ocu-Mir-210 Ofu-Mir-210 Pab-Mir-210 Pau-Mir-210 Pbv-Mir-210 Pca-Mir-210 Pma-Mir-210 Rno-Mir-210 Sha-Mir-210 Sko-Mir-210 Sma-Mir-210 Snu-Mir-210 Spt-Mir-210 Tgu-Mir-210 Tni-Mir-210 War-Mir-210 Xtr-Mir-210

Node of Origin (locus)

C. sculpturatus

Node of Origin (family)

Bilateria

Genome context
(GCF_000671375.1_CSC)

NW_019385932.1: 51022-51079 [-] Ensembl

Seed

UGUGCGU

Precursor
(pre-Mir +30nt flank)

GUGCUGGUUCUUCACGUGAGACGUCCACAGUAGCUGCUGGACACGGCACAAGAUAUCCGUCGAUUCUUGUGCGUGUGACAGCGGCUAUCGUAUAACGUCAUGUAUCAUCCAGACGGAA

Get precursor sequence

Structure

        10        20         30        40         50         
GUGCUGGUUCUUCACGUGA     CC-  A          G-|    G       UAUCC 
                   GACGU   AC GUAGCUGCUG  ACACG CACAAGA     \
                   CUGCA   UG UAUCGGCGAC  UGUGC GUGUUCU     G
AAGGCAGACCUACUAUGUA     AUA  C          AG^    -       UAGCU 
      110       100        90        80         70        60

Deep sequencing

Go to detailed chart

Comment

There is a second Drosha cut +1 on the 5p arm, likely the result of non-monouridylated 3' termini.

3' NTU

Yes

Motifs

UG at 5p(-14), CNNC at 3p(+17)

Tissue expression

Fe	Fe	Fe	Fe	Ma	Ma	Ma

Star sequence

Csc-Mir-210-P14_5p*

mirBase accession

None

Sequence

0- UAGCUGCUGGACACGGCACAAGA -23

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Mature sequence

Csc-Mir-210-P14_3p

mirBase accession

None

Sequence

36- UUGUGCGUGUGACAGCGGCUAU -58

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