MirGeneDB 2.1

MirGeneDB ID

Obi-Mir-210-P16

Family name MIR-210 (all species)
Seed UGUGCGU
Species California two-spot octopus (Octopus bimaculoides)
MiRBase ID
Paralogues Obi-Mir-210-P15-v1  Obi-Mir-210-P15-v2 
Orthologues Aca-Mir-210  Ami-Mir-210  Bfl-Mir-210  Bla-Mir-210  Bta-Mir-210  Cfa-Mir-210  Cgi-Mir-210  Cli-Mir-210  Cmi-Mir-210  Cpi-Mir-210  Cpo-Mir-210  Dma-Mir-210  Dno-Mir-210  Dpu-Mir-210  Dre-Mir-210  Ebu-Mir-210  Efe-Mir-210  Esc-Mir-210-P16  Ete-Mir-210  Gga-Mir-210  Gja-Mir-210  Gmo-Mir-210  Hsa-Mir-210  Isc-Mir-210  Lan-Mir-210  Lch-Mir-210  Lgi-Mir-210  Loc-Mir-210  Mal-Mir-210  Mdo-Mir-210  Mml-Mir-210  Mmu-Mir-210  Mun-Mir-210  Npo-Mir-210  Oan-Mir-210  Ocu-Mir-210  Ovu-Mir-210-P16  Pbv-Mir-210  Pma-Mir-210  Rno-Mir-210  Sha-Mir-210  Sko-Mir-210  Spt-Mir-210  Tgu-Mir-210  Tni-Mir-210  Xtr-Mir-210 
Node of Origin (locus) Coleoidea
Node of Origin (family) Bilateria
Genome context
(PRJNA270931_OBI)
KQ418188: 99773-99830 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
AUGAUGAUGAUACUGCUGGUGGCUGCUGCAGUCACUGUCCCCCGUACUAACAUUUCUUUAAACGGUGUUGUGCGUGAGACAGCGACCGCAGAAGCUAACCACAUUCGCCAAAUCAUCA
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Structure
        10          20        30        40        50         
AUGAUGAUGAUACUGCU-  -|    G    A   A     CCC     U    UUUCUU 
                  GG UGGCU CUGC GUC CUGUC   CGUAC AACA      \
                  CC AUCGA GACG CAG GACAG   GCGUG UUGU      U
ACUACUAAACCGCUUACA  A^    A    C   C     AGU     -    GGCAAA 
      110       100        90        80        70         60
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
 +
To
Star sequence

Obi-Mir-210-P16_5p*

mirBase accessionNone
Sequence
0- GUCACUGUCCCCCGUACUAACA -22
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Mature sequence

Obi-Mir-210-P16_3p

mirBase accessionNone
Sequence
37- UUGUGCGUGAGACAGCGACCG -58
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