Mir-210-P21

MirGeneDB ID

Xla-Mir-210-P21

Family name

MIR-210 (all species)

Species

African clawed frog (Xenopus laevis)

MiRBase ID

xla-mir-210

Paralogues

Xla-Mir-210-P22

Orthologues

Aca-Mir-210 Agr-Mir-210 Ami-Mir-210 Bfl-Mir-210 Bla-Mir-210 Bta-Mir-210 Cfa-Mir-210 Cja-Mir-210 Cli-Mir-210 Cmi-Mir-210 Cpi-Mir-210 Cpo-Mir-210 Dgr-Mir-210 Dma-Mir-210 Dno-Mir-210 Dpu-Mir-210 Dre-Mir-210 Eba-Mir-210 Ebu-Mir-210 Eca-Mir-210 Egr-Mir-210 Ete-Mir-210 Gga-Mir-210 Gja-Mir-210 Gmo-Mir-210 Hsa-Mir-210 Isc-Mir-210 Lan-Mir-210 Lch-Mir-210 Lgi-Mir-210 Lhy-Mir-210 Llo-Mir-210 Loc-Mir-210 Mal-Mir-210 Mdo-Mir-210 Mgi-Mir-210 Mml-Mir-210 Mmr-Mir-210 Mmu-Mir-210 Mom-Mir-210 Mun-Mir-210 Neu-Mir-210 Npo-Mir-210 Oan-Mir-210 Ocu-Mir-210 Ofu-Mir-210 Pab-Mir-210 Pau-Mir-210 Pbv-Mir-210 Pca-Mir-210 Pma-Mir-210 Rno-Mir-210 Sha-Mir-210 Sko-Mir-210 Sma-Mir-210 Snu-Mir-210 Spt-Mir-210 Tgu-Mir-210 Tni-Mir-210 Tur-Mir-210-P21 War-Mir-210 Xtr-Mir-210

Node of Origin (locus)

X. laevis

Node of Origin (family)

Bilateria

Genome context
(GCF_001663975.1_XLA_v2)

NC_030730.1: 24193268-24193330 [-] UCSC Ensembl

Seed

UGUGCGU

Precursor
(pre-Mir +30nt flank)

UUGCAGCAACAGACUAUCCAGAUGUAGGUGAGCCACUGACUAACGCACAUUGCGCUGCUGCUAAAAUGCCACUGUGCGUGUGACAGCGGCUAACCGGCAUCUAGGAAUAACGUGAAUUGGAUU

Get precursor sequence

Structure

        10          20        30        40        50        60 
UUGCAGCAACAGACUAU-  -|     A   G    A   ACUA       U  CGCUGCUG 
                  CC AGAUGU GGU AGCC CUG    ACGCACA UG        \
                  GG UCUACG CCA UCGG GAC    UGCGUGU AC        C
UUAGGUUAAGUGCAAUAA  A^     G   A    C   AGUG       C  CGUAAAAU 
 120       110       100        90        80        70