Mir-210-P15-v1

MirGeneDB ID

Ovu-Mir-210-P15-v1

Family name

MIR-210 (all species)

Seed

UUGUGCG

Species

Common octopus (Octopus vulgaris)

MiRBase ID

Paralogues

Ovu-Mir-210-P15-v2 Ovu-Mir-210-P16

Orthologues

Aca-Mir-210 Ami-Mir-210 Bfl-Mir-210 Bla-Mir-210 Bta-Mir-210 Cfa-Mir-210 Cgi-Mir-210 Cli-Mir-210 Cmi-Mir-210 Cpi-Mir-210 Cpo-Mir-210 Dma-Mir-210 Dno-Mir-210 Dpu-Mir-210 Dre-Mir-210 Ebu-Mir-210 Efe-Mir-210 Esc-Mir-210-P15-v1 Esc-Mir-210-P15-v2 Ete-Mir-210 Gga-Mir-210 Gja-Mir-210 Gmo-Mir-210 Hsa-Mir-210 Isc-Mir-210 Lan-Mir-210 Lch-Mir-210 Lgi-Mir-210 Loc-Mir-210 Mal-Mir-210 Mdo-Mir-210 Mml-Mir-210 Mmu-Mir-210 Mun-Mir-210 Npo-Mir-210 Oan-Mir-210 Obi-Mir-210-P15-v1 Obi-Mir-210-P15-v2 Ocu-Mir-210 Pbv-Mir-210 Pma-Mir-210 Rno-Mir-210 Sha-Mir-210 Sko-Mir-210 Spt-Mir-210 Tgu-Mir-210 Tni-Mir-210 Xtr-Mir-210

Node of Origin (locus)

Coleoidea

Node of Origin (family)

Bilateria

Genome context
(GCA_003957725.1_ASM395772v1_OVU)

RXHP01004280.1: 1748-1802 [-] Ensembl

Precursor
(pre-Mir +30nt flank)

AGAACAAAAACACUCGAUGUCGUAUGUUCGUCGCUGUCGCACGUUACUAGGAAACUCAUGGAUUCUUGUGCGUGUGACAGUGACUAUGCAUGGGCAUUCUAUGCGGCGGUUUUUC

Get precursor sequence

Structure

        10          20         30        40        50        
AGAACAAAAACACUCGA--|   G     UC-               U  U     ACUC 
                   UGUC UAUGU   GUCGCUGUCGCACGU AC AGGAA    \
                   ACGG GUACG   CAGUGACAGUGUGCG UG UUCUU    A
CUUUUUGGCGGCGUAUCUU^   -     UAU               -  -     AGGU 
   110       100         90        80        70          60

Deep sequencing

Go to detailed chart

3' NTU

Motifs

Tissue expression

Oc	Oc	Oc	Oc	Oc	Oc	Oc	Oc	Oc	Oc	Oc	Oc	Oc	Oc	Oc	Oc	Oc	Oc

Star sequence

Ovu-Mir-210-P15-v1_5p*

mirBase accession

None

Sequence

0- UCGCUGUCGCACGUUACUAGGAA -23

Get sequence

Mature sequence

Ovu-Mir-210-P15-v1_3p

mirBase accession

None

Sequence

34- CUUGUGCGUGUGACAGUGACU -55

Get sequence