MirGeneDB ID | Mml-Mir-219-P2 |
Family name |
MIR-219 (all species) |
Species |
Rhesus monkey (Macaca mulatta) |
MiRBase ID |
mml-mir-219-2
|
Paralogues |
Mml-Mir-219-P2-as
Mml-Mir-219-P3
|
Orthologues |
Aae-Mir-219
Aca-Mir-219-P2
Aga-Mir-219
Agr-Mir-219
Ami-Mir-219-P2
Bfl-Mir-219
Bge-Mir-219
Bko-Mir-219
Bla-Mir-219
Bpl-Mir-219
Bta-Mir-219-P2
Bta-Mir-219-P2-as
Cfa-Mir-219-P2
Cfa-Mir-219-P2-as
Cin-Mir-219
Cja-Mir-219-P2
Cli-Mir-219-P2
Cmi-Mir-219-P2
Cpi-Mir-219-P2
Cpo-Mir-219-P2
Cpo-Mir-219-P2-as
Csc-Mir-219
Cte-Mir-219
Dan-Mir-219
Dgr-Mir-219
Dlo-Mir-219
Dma-Mir-219
Dme-Mir-219
Dmo-Mir-219
Dno-Mir-219-P2
Dno-Mir-219-P2-as
Dpu-Mir-219
Dre-Mir-219-P2a
Dre-Mir-219-P2b
Dsi-Mir-219
Dya-Mir-219
Eba-Mir-219
Eca-Mir-219-P2
Egr-Mir-219
Esc-Mir-219
Ete-Mir-219-P2
Gga-Mir-219-P2
Gja-Mir-219-P2
Gmo-Mir-219-P2a
Gpa-Mir-219
Gsa-Mir-219
Gsp-Mir-219
Hmi-Mir-219
Hru-Mir-219
Hsa-Mir-219-P2
Hsa-Mir-219-P2-as
Isc-Mir-219
Laf-Mir-219-P2
Lan-Mir-219
Lch-Mir-219-P2
Llo-Mir-219
Loc-Mir-219-P2
Mal-Mir-219-P2a
Mal-Mir-219-P2b
Mdo-Mir-219-P2
Mgi-Mir-219
Mmr-Mir-219-P2
Mmu-Mir-219-P2
Mmu-Mir-219-P2-as
Mom-Mir-219
Mun-Mir-219-P2
Neu-Mir-219-P2
Oan-Mir-219-P2
Obi-Mir-219
Ocu-Mir-219-P2
Ocu-Mir-219-P2-as
Ofu-Mir-219
Ovu-Mir-219
Pab-Mir-219-P2
Pab-Mir-219-P2-as
Pau-Mir-219
Pbv-Mir-219-P2
Pca-Mir-219
Pcr-Mir-219
Pfl-Mir-219
Pma-Mir-219-o2
Pmi-Mir-219
Pve-Mir-219
Rno-Mir-219-P2
Rno-Mir-219-P2-as
Rph-Mir-219
Sha-Mir-219-P2
Sko-Mir-219
Sma-Mir-219
Sne-Mir-219
Snu-Mir-219
Spt-Mir-219-P2
Spu-Mir-219
Sro-Mir-219
Sto-Mir-219-P2
Tca-Mir-219
Tgu-Mir-219-P2
Tni-Mir-219-P2a
Tni-Mir-219-P2b
Tur-Mir-219
War-Mir-219
Xbo-Mir-219
Xla-Mir-219-P2c
Xla-Mir-219-P2d
Xtr-Mir-219-P2
|
Node of Origin (locus) |
Gnathostomata
|
Node of Origin (family) |
Bilateria
|
Genome context (GCA_003339765.3_Mmul_10_traces) |
CM014350.1: 12193192-12193256 [+]
UCSC
Ensembl
|
Clustered miRNAs (< 50kb from Mir-219-P2) |
Mir-219-P2-as
CM014350.1: 12193190-12193254 [-]
UCSC
Ensembl
Mir-219-P2
CM014350.1: 12193192-12193256 [+]
UCSC
Ensembl
|
Seed |
GAUUGUC |
Precursor (pre-Mir +30nt flank) |
CCAGGGCCCUGAACUCAGGGGCUUCGCCACUGAUUGUCCAAACGCAAUUCUUGUACGAGUCUGCGGCCAACCGAGAAUUGUGGCUGGACAUCUGUGGCUGAGCUCCGGGCGCAACAGGGGCGGGG
Get precursor sequence
|
Structure | 10 20 30 40 50 60
CCAGGGCCCUGAACUCA--| C U U AA UACGAGUC
GGGGCUU GCCAC GAU GUCCA CGCAAUUCUUG U
CCUCGAG CGGUG CUA CAGGU GUGUUAAGAGC G
GGGGCGGGGACAACGCGGG^ U U - CG CAACCGGC
120 110 100 90 80 70 |
Deep sequencing |
Go to detailed chart
|
Comment | The MIR-219 family shows substantial variation of arm-usage and is currently, across all species, considered a co-mature. |
3' NTU |
No
|
Motifs | CNNC at 3p(+17) |
Tissue expression
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Bo |
Br |
Br |
Br |
He |
Ki |
Li |
Lu |
Ly |
Sk |
Sp |
Te |
Th |
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Mature sequence |
Mml-Mir-219-P2_5p |
mirBase accession | MIMAT0006245 |
Sequence |
0- UGAUUGUCCAAACGCAAUUCUUG -23
Get sequence
|
Proposed targets |
TargetScanVert: mml-miR-219-5p
|
Co-mature sequence |
Mml-Mir-219-P2_3p |
mirBase accession | MIMAT0006246 |
Sequence |
43- AGAAUUGUGGCUGGACAUCUGU -65
Get sequence
|
Proposed targets |
TargetScanVert: mml-miR-219-3p
|