MirGeneDB

MirGeneDB ID

Oan-Mir-219-P2

Family name MIR-219 (all species)
Seed GAAUUGU
Species Platypus (Ornithorhynchus anatinus)
MiRBase ID oan-mir-219
Paralogues
Orthologues Aae-Mir-219  Aca-Mir-219-P2  Ami-Mir-219-P2  Bfl-Mir-219  Bge-Mir-219  Bta-Mir-219-P2  Bta-Mir-219-P2-as  Cfa-Mir-219-P2  Cfa-Mir-219-P2-as  Cgi-Mir-219  Cin-Mir-219  Cli-Mir-219-P2  Cpi-Mir-219-P2  Cpo-Mir-219-P2  Cpo-Mir-219-P2-as  Cte-Mir-219  Dan-Mir-219  Dme-Mir-219  Dmo-Mir-219  Dno-Mir-219-P2  Dno-Mir-219-P2-as  Dpu-Mir-219  Dre-Mir-219-P2a  Dre-Mir-219-P2b  Ete-Mir-219-P2  Gga-Mir-219-P2  Hsa-Mir-219-P2  Hsa-Mir-219-P2-as  Isc-Mir-219  Lan-Mir-219  Mdo-Mir-219-P2  Mml-Mir-219-P2  Mml-Mir-219-P2-as  Mmu-Mir-219-P2  Mmu-Mir-219-P2-as  Ocu-Mir-219-P2  Ocu-Mir-219-P2-as  Pfl-Mir-219  Pmi-Mir-219  Rno-Mir-219-P2  Rno-Mir-219-P2-as  Sha-Mir-219-P2  Sko-Mir-219  Spu-Mir-219  Sto-Mir-219-P2  Tca-Mir-219  Tgu-Mir-219-P2  Xtr-Mir-219-P2 
Node of Origin (locus) Vertebrata
Node of Origin (family) Bilateria
Genome context
(mOrnAna1.p.v1_plustraces)
NC_041731.1: 32222732-32222796 [+]
Precursor
(pre-Mir +30nt flank)
GGCCCAACCGAGCCAGCGGGGCCCCGCCGCUGAUUGUCCAAACGCAAUUCUUGUGCGAGUUUGCGGCCAACCGAGAAUUGUGACUGGACAUCUGUGGCUGGGCUCCCGGCGCGACGCGGGCCGGA
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Structure
        10         20         30        40        50        60  
GGCCCAACCGAGCCAGC-   -|   C     U   U     AA           UGCGAGUU 
                  GGG GCCC GCCGC GAU GUCCA  CGCAAUUCUUG        U
                  CCC CGGG CGGUG CUA CAGGU  GUGUUAAGAGC        G
AGGCCGGGCGCAGCGCGG   U^   U     U   -     CA           CAACCGGC 
   120       110       100        90         80        70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
Br Ce He Ki Te
Star sequence

Oan-Mir-219-P2_5p*

MirBase accessionMIMAT0006899
Sequence
0- UGAUUGUCCAAACGCAAUUCUUG -23
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Mature sequence

Oan-Mir-219-P2_3p

MirBase accessionMIMAT0006900
Sequence
43- AGAAUUGUGACUGGACAUCUGU -65
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