MirGeneDB 2.1
MirGeneDB ID

Bta-Mir-219-P2-as

Family name MIR-219 (all species)
Seed GAAUUGC
Species Cow (Bos taurus)
MiRBase ID bta-mir-219b
Paralogues Bta-Mir-219-P2  Bta-Mir-219-P3 
Orthologues Aae-Mir-219  Aca-Mir-219-P2  Ami-Mir-219-P2  Bfl-Mir-219  Bge-Mir-219  Bla-Mir-219  Cfa-Mir-219-P2  Cfa-Mir-219-P2-as  Cgi-Mir-219  Cin-Mir-219  Cli-Mir-219-P2  Cmi-Mir-219-P2  Cpi-Mir-219-P2  Cpo-Mir-219-P2  Cpo-Mir-219-P2-as  Csc-Mir-219  Cte-Mir-219  Dan-Mir-219  Dma-Mir-219  Dme-Mir-219  Dmo-Mir-219  Dno-Mir-219-P2  Dno-Mir-219-P2-as  Dpu-Mir-219  Dre-Mir-219-P2a  Dre-Mir-219-P2b  Dsi-Mir-219  Dya-Mir-219  Esc-Mir-219  Ete-Mir-219-P2  Gga-Mir-219-P2  Gja-Mir-219-P2  Gmo-Mir-219-P2a  Hsa-Mir-219-P2  Hsa-Mir-219-P2-as  Isc-Mir-219  Lan-Mir-219  Lch-Mir-219-P2  Loc-Mir-219-P2  Mal-Mir-219-P2a  Mal-Mir-219-P2b  Mdo-Mir-219-P2  Mml-Mir-219-P2  Mml-Mir-219-P2-as  Mmu-Mir-219-P2  Mmu-Mir-219-P2-as  Mun-Mir-219-P2  Oan-Mir-219-P2  Obi-Mir-219  Ocu-Mir-219-P2  Ocu-Mir-219-P2-as  Ovu-Mir-219  Pbv-Mir-219-P2  Pfl-Mir-219  Pma-Mir-219-o2  Pmi-Mir-219  Rno-Mir-219-P2  Rno-Mir-219-P2-as  Sha-Mir-219-P2  Sko-Mir-219  Spt-Mir-219-P2  Spu-Mir-219  Sto-Mir-219-P2  Tca-Mir-219  Tgu-Mir-219-P2  Tni-Mir-219-P2a  Tni-Mir-219-P2b  Xbo-Mir-219  Xla-Mir-219-P2c  Xla-Mir-219-P2d  Xtr-Mir-219-P2 
Node of Origin (locus) Eutheria
Node of Origin (family) Bilateria
Genome context
(GCF_002263795.1_ARS-UCD1.2_BTA)		 NC_037338.1: 98985290-98985354 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-219-P2-as)		 Mir-219-P2 NC_037338.1: 98985288-98985352 [-] UCSC Ensembl
Mir-219-P2-as NC_037338.1: 98985290-98985354 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CCGCCCCUGUCGCUUCCAGAGCUCAGCCACAGAUGUCCAGCCACAAUUCUCGGUUGGCCGCAGACUCGUACAAGAAUUGCGUUUGGACAAUCAGUGGCGAAGCUCCUGAGUUCAGGGCCCCGGUC
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Structure
        10          20        30         40        50        60 
CCGCCCCUGUCGCUUCCA--     CA     A  -|      CCA       CGGUUGGCCG 
                    GAGCU  GCCAC GA UGUCCAG   CAAUUCU          C
                    CUCGA  CGGUG CU ACAGGUU   GUUAAGA          A
CUGGCCCCGGGACUUGAGUC     AG     A  A^      UGC       ACAUGCUCAG 
   120       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
Ad Cd Fe Bo Br Ce Co Co De He Hy Ir Ki La Lo No Op Or Pe Re Su Te
Star sequence

Bta-Mir-219-P2-as_5p*
mirBase accessionNone
Sequence 
0- AGAUGUCCAGCCACAAUUCUCG -22
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Mature sequence

Bta-Mir-219-P2-as_3p
mirBase accessionMIMAT0040926
Sequence 
42- AGAAUUGCGUUUGGACAAUCAGU -65
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