MirGeneDB 3.0
MirGeneDB ID

Cfa-Mir-219-P2

Family name MIR-219 (all species)
Species Dog (Canis familiaris)
MiRBase ID cfa-mir-219-2
Paralogues Cfa-Mir-219-P2-as  Cfa-Mir-219-P3 
Orthologues Aae-Mir-219  Aca-Mir-219-P2  Aga-Mir-219  Agr-Mir-219  Ami-Mir-219-P2  Bfl-Mir-219  Bge-Mir-219  Bko-Mir-219  Bla-Mir-219  Bpl-Mir-219  Bta-Mir-219-P2  Bta-Mir-219-P2-as  Cin-Mir-219  Cja-Mir-219-P2  Cli-Mir-219-P2  Cmi-Mir-219-P2  Cpi-Mir-219-P2  Cpo-Mir-219-P2  Cpo-Mir-219-P2-as  Csc-Mir-219  Cte-Mir-219  Dan-Mir-219  Dgr-Mir-219  Dlo-Mir-219  Dma-Mir-219  Dme-Mir-219  Dmo-Mir-219  Dno-Mir-219-P2  Dno-Mir-219-P2-as  Dpu-Mir-219  Dre-Mir-219-P2a  Dre-Mir-219-P2b  Dsi-Mir-219  Dya-Mir-219  Eba-Mir-219  Eca-Mir-219-P2  Egr-Mir-219  Esc-Mir-219  Ete-Mir-219-P2  Gga-Mir-219-P2  Gja-Mir-219-P2  Gmo-Mir-219-P2a  Gpa-Mir-219  Gsa-Mir-219  Gsp-Mir-219  Hmi-Mir-219  Hru-Mir-219  Hsa-Mir-219-P2  Hsa-Mir-219-P2-as  Isc-Mir-219  Laf-Mir-219-P2  Lan-Mir-219  Lch-Mir-219-P2  Llo-Mir-219  Loc-Mir-219-P2  Mal-Mir-219-P2a  Mal-Mir-219-P2b  Mdo-Mir-219-P2  Mgi-Mir-219  Mml-Mir-219-P2  Mml-Mir-219-P2-as  Mmr-Mir-219-P2  Mmu-Mir-219-P2  Mmu-Mir-219-P2-as  Mom-Mir-219  Mun-Mir-219-P2  Neu-Mir-219-P2  Oan-Mir-219-P2  Obi-Mir-219  Ocu-Mir-219-P2  Ocu-Mir-219-P2-as  Ofu-Mir-219  Ovu-Mir-219  Pab-Mir-219-P2  Pab-Mir-219-P2-as  Pau-Mir-219  Pbv-Mir-219-P2  Pca-Mir-219  Pcr-Mir-219  Pfl-Mir-219  Pma-Mir-219-o2  Pmi-Mir-219  Pve-Mir-219  Rno-Mir-219-P2  Rno-Mir-219-P2-as  Rph-Mir-219  Sha-Mir-219-P2  Sko-Mir-219  Sma-Mir-219  Sne-Mir-219  Snu-Mir-219  Spt-Mir-219-P2  Spu-Mir-219  Sro-Mir-219  Sto-Mir-219-P2  Tca-Mir-219  Tgu-Mir-219-P2  Tni-Mir-219-P2a  Tni-Mir-219-P2b  Tur-Mir-219  War-Mir-219  Xbo-Mir-219  Xla-Mir-219-P2c  Xla-Mir-219-P2d  Xtr-Mir-219-P2 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Bilateria
Genome context
(canFam3_add)		 chr9: 55139107-55139171 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-219-P2)		 Mir-219-P2-as chr9: 55139105-55139169 [-] UCSC Ensembl
Mir-219-P2 chr9: 55139107-55139171 [+] UCSC Ensembl
Seed GAUUGUC
Precursor
(pre-Mir +30nt flank)		 
CUGGGGCCCCGAACUCGGGGGCUUUGCCACUGAUUGUCCAAACGCAAUUCUUGUACGAGUCUGCGGCCAACCGAGAAUUGUGGCUGGACAUCUGUGGCUGAGCUCCGGGCGCAACAGGGGCGGAA
Get precursor sequence
Structure
        10          20        30        40        50        60  
CUGGGGCCCCGAACUCG--|      U     U   U     AA           UACGAGUC 
                   GGGGCUU GCCAC GAU GUCCA  CGCAAUUCUUG        U
                   CCUCGAG CGGUG CUA CAGGU  GUGUUAAGAGC        G
AAGGCGGGGACAACGCGGG^      U     U   -     CG           CAACCGGC 
   120       110       100        90         80        70
Deep sequencing
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CommentThe MIR-219 family shows substantial variation of arm-usage and is currently, across all species, considered a co-mature.
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
An An An Bl Ce Co He Hi Hi Hy Ki Ki Li Lu Ov Sk Te Te
Mature sequence

Cfa-Mir-219-P2_5p
mirBase accessionMIMAT0006611
Sequence 
0- UGAUUGUCCAAACGCAAUUCUUG -23
Get sequence
Proposed targets TargetScanVert: cfa-miR-219-5p
miRDB: MIMAT0006611
Co-mature sequence

Cfa-Mir-219-P2_3p
mirBase accessionMIMAT0006729
Sequence 
43- AGAAUUGUGGCUGGACAUCUGU -65
Get sequence
Proposed targets TargetScanVert: cfa-miR-219-3p
miRDB: MIMAT0006729