MirGeneDB 2.1

110 microRNA genes with seed UGCAUAG
Sort by genome coordinates Motifs
MirGeneDB ID MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) 3' NTU  UG  UGUG CNNC
Asu-Mir-153 None MIR-153 UGCAUAG None None Scaffold130 247875 247936 - Bilateria Bilateria No 1
Bfl-Mir-153 bfl-mir-153 MIR-153 UGCAUAG None MIMAT0025391 NC_049988.1 729633 729692 + Bilateria Bilateria Unknown 1
Bla-Mir-153 None MIR-153 UGCAUAG None None Sc0000096 240249 240308 + Bilateria Bilateria No 1
Bpl-Mir-153 None MIR-153 UGCAUAG None None QEOQ01000261.1 59254 59310 + Bilateria Bilateria No 1
Cgi-Mir-153 None MIR-153 UGCAUAG None None scaffold586 430269 430326 + Bilateria Bilateria No 1
Cin-Mir-153 cin-mir-153 MIR-153 UGCAUAG MIMAT0015261 MIMAT0006104 5 1106327 1106387 + Bilateria Bilateria No
Cte-Mir-153 cte-mir-153 MIR-153 UGCAUAG None MIMAT0009528 CAPTEscaffold_2 539891 539950 - Bilateria Bilateria No 1 1
Dma-Mir-153 None MIR-153 UGCAUAG None None NC_046175.1 7410422 7410486 + Bilateria Bilateria No
Dpu-Mir-153 dpu-mir-153 MIR-153 UGCAUAG None MIMAT0012642 DAPPUscaffold_3 3560645 3560707 - Bilateria Bilateria Unknown
Isc-Mir-153 isc-mir-153 MIR-153 UGCAUAG None MIMAT0012688 DS642248 1296661 1296718 - Bilateria Bilateria No 1 1
Lan-Mir-153 None MIR-153 UGCAUAG None None LFEI01000283 95805 95862 - Bilateria Bilateria No 1
Lgi-Mir-153 lgi-mir-153 MIR-153 UGCAUAG None MIMAT0009582 934768777_BGOB62773 183 240 + Bilateria Bilateria No 1 1
Npo-Mir-153 None MIR-153 UGCAUAG None None JACATO010000312.1 1302753 1302811 + Bilateria Bilateria Unknown 1 1
Obi-Mir-153 None MIR-153 UGCAUAG None None KQ421765 100522 100579 + Bilateria Bilateria No 1
Ovu-Mir-153 None MIR-153 UGCAUAG None None RXHP01012359.1 29086 29143 + Bilateria Bilateria No 1
Pfl-Mir-153 None MIR-153 UGCAUAG None None LD348957.1 284194 284252 + Bilateria Bilateria No 1 1
Sko-Mir-153 sko-mir-153 MIR-153 UGCAUAG None MIMAT0009629 NW_003155741.1 97673 97731 + Bilateria Bilateria No 1 1
Sme-Mir-153 sme-mir-2163 MIR-153 UGCAUAG MIMAT0012154 MIMAT0011257 NNSW01000044_dd_Smes_g4_44 2086441 2086504 - Bilateria Bilateria Yes 1
Spu-Mir-153 spu-mir-153 MIR-153 UGCAUAG MIMAT0019162 MIMAT0009669 AAGJ06000019.1 10025885 10025953 - Bilateria Bilateria No
Xbo-Mir-153 None MIR-153 UGCAUAG None None 3C-assembly_contig_1898 3598015 3598075 - Bilateria Bilateria No 1 1 1
Pma-Mir-153-o1 pma-mir-153-1 MIR-153 UGCAUAG MIMAT0019483 MIMAT0019484 NC_046072.1 547240 547301 - P. marinus Bilateria No 1
Pma-Mir-153-o2 pma-mir-153-2 MIR-153 UGCAUAG None MIMAT0019484 NC_046087.1 10331164 10331225 + P. marinus Bilateria No 1 1
Pma-Mir-153-o3 pma-mir-153-3 MIR-153 UGCAUAG None MIMAT0019484 NC_046102.1 491761 491824 - P. marinus Bilateria No 1 1 1
Aca-Mir-153-P1 aca-mir-153-1 MIR-153 UGCAUAG None MIMAT0021786 6 6762624 6762684 - Gnathostomata Bilateria No 1
Ami-Mir-153-P1 ami-mir-153-2 MIR-153 UGCAUAG None MIMAT0038184 NW_017707901.1 19689909 19689969 + Gnathostomata Bilateria No 1
Bta-Mir-153-P1 bta-mir-153-2 MIR-153 UGCAUAG None MIMAT0009239 NC_037331.1 118753595 118753655 - Gnathostomata Bilateria No
Cfa-Mir-153-P1 cfa-mir-153 MIR-153 UGCAUAG None MIMAT0009840 chr16 19932384 19932444 - Gnathostomata Bilateria No 1
Cli-Mir-153-P1 cli-mir-153b MIR-153 UGCAUAG MIMAT0038547 MIMAT0038548 scaffold337 193415 193475 - Gnathostomata Bilateria No 1
Cmi-Mir-153-P1 None MIR-153 UGCAUAG None None KI636064.1 217179 217238 + Gnathostomata Bilateria No 1
Cpi-Mir-153-P1 cpi-mir-153-2 MIR-153 UGCAUAG None MIMAT0037788 JH584683 10944342 10944402 - Gnathostomata Bilateria No 1
Cpo-Mir-153-P1 cpo-mir-153 MIR-153 UGCAUAG MIMAT0047034 MIMAT0047035 scaffold_32 5180976 5181036 - Gnathostomata Bilateria No 1
Dno-Mir-153-P1 dno-mir-153b MIR-153 UGCAUAG MIMAT0047681 MIMAT0047682 JH568072 1095486 1095546 + Gnathostomata Bilateria No 1
Ete-Mir-153-P1 None MIR-153 UGCAUAG None None JH980304 26613928 26613988 - Gnathostomata Bilateria No 1
Gga-Mir-153-P1 gga-mir-153 MIR-153 UGCAUAG MIMAT0026502 MIMAT0001119 2 8899858 8899918 - Gnathostomata Bilateria No 1
Gja-Mir-153-P1 None MIR-153 UGCAUAG None None NW_015177029.1 393753 393813 + Gnathostomata Bilateria No 1
Hsa-Mir-153-P1 hsa-mir-153-2 MIR-153 UGCAUAG MIMAT0026480 MIMAT0000439 chr7 157574349 157574409 - Gnathostomata Bilateria No
Lch-Mir-153-P1 None MIR-153 UGCAUAG None None JH128207.1 36971 37031 + Gnathostomata Bilateria Unknown 1
Loc-Mir-153-P1 None MIR-153 UGCAUAG None None LG9 41047968 41048028 + Gnathostomata Bilateria No 1
Mdo-Mir-153-P1 mdo-mir-153-2 MIR-153 UGCAUAG MIMAT0026931 MIMAT0012738 8 224496563 224496623 - Gnathostomata Bilateria No 1
Mml-Mir-153-P1 mml-mir-153-2 MIR-153 UGCAUAG MIMAT0031060 MIMAT0002271 chr3 184009330 184009390 - Gnathostomata Bilateria No
Mmu-Mir-153-P1 mmu-mir-153 MIR-153 UGCAUAG MIMAT0016992 MIMAT0000163 chr12 117250821 117250881 + Gnathostomata Bilateria No 1
Mun-Mir-153-P1 None MIR-153 UGCAUAG None None 153-P1_LR594632.1:78989623-78989764 42 101 - Gnathostomata Bilateria No 1
Oan-Mir-153-P1 oan-mir-153-2 MIR-153 UGCAUAG MIMAT0031116 MIMAT0007005 NC_041740.1 6971996 6972056 - Gnathostomata Bilateria No 1
Ocu-Mir-153-P1 ocu-mir-153 MIR-153 UGCAUAG MIMAT0048269 MIMAT0048270 chr13 9786312 9786372 + Gnathostomata Bilateria No
Pbv-Mir-153-P1 pbv-mir-153-1 MIR-153 UGCAUAG MIMAT0038970 MIMAT0038971 KE953157.1 252467 252527 - Gnathostomata Bilateria No 1
Rno-Mir-153-P1 rno-mir-153 MIR-153 UGCAUAG MIMAT0017135 MIMAT0000855 chr6 145105077 145105137 + Gnathostomata Bilateria No 1
Sha-Mir-153-P1 None MIR-153 UGCAUAG None None GL861670.1 4132351 4132411 - Gnathostomata Bilateria No 1
Spt-Mir-153-P1 None MIR-153 UGCAUAG None None QEPC01002394.1 550573 550633 - Gnathostomata Bilateria Unknown 1
Sto-Mir-153-P1 None MIR-153 UGCAUAG None None BFAA01008399.1 88044 88104 - Gnathostomata Bilateria No 1
Tgu-Mir-153-P1 tgu-mir-153-1 MIR-153 UGCAUAG MIMAT0026997 MIMAT0014552 2 9267710 9267770 - Gnathostomata Bilateria No 1
Xtr-Mir-153-P1 xtr-mir-153-2 MIR-153 CAUUUUU None MIMAT0003607 chr6 10079159 10079218 - Gnathostomata Bilateria No 1
Dre-Mir-153-P1a dre-mir-153a MIR-153 UGCAUAG MIMAT0031978 MIMAT0001849 chr7 40485520 40485580 + Clupeocephala Bilateria No 1
Gmo-Mir-153-P1a gmo-mir-153a-2 MIR-153 UGCAUAG None MIMAT0044210 GeneScaffold_3129 46261 46320 - Clupeocephala Bilateria No
Mal-Mir-153-P1a None MIR-153 UGCAUAG None None KV884743.1 1609715 1609774 - Clupeocephala Bilateria No 1 1
Gmo-Mir-153-P1b gmo-mir-153a-1 MIR-153 UGCAUAG None MIMAT0044210 GeneScaffold_3123 32539 32598 + Clupeocephala Bilateria No 1
Mal-Mir-153-P1b None MIR-153 UGCAUAG None None KV884813.1 1230911 1230970 - Clupeocephala Bilateria No 1
Tni-Mir-153-P1b tni-mir-153a MIR-153 UGCAUAG None MIMAT0003012 15 948753 948813 + Clupeocephala Bilateria No 1
Xla-Mir-153-P1c None MIR-153 UGCAUAG None None NC_030734.1 14000822 14000881 - X. laevis Bilateria No 1
Xla-Mir-153-P1d None MIR-153 UGCAUAG None None NC_030735.1 11412748 11412807 - X. laevis Bilateria No 1
Aca-Mir-153-P2 aca-mir-153-2 MIR-153 UGCAUAG MIMAT0021787 MIMAT0021786 1 95540877 95540935 + Gnathostomata Bilateria No 1
Ami-Mir-153-P2 ami-mir-153-1 MIR-153 UGCAUAG None MIMAT0038184 NW_017710271.1 22538 22596 - Gnathostomata Bilateria No 1
Bta-Mir-153-P2 bta-mir-153-1 MIR-153 UGCAUAG None MIMAT0009239 NC_037329.1 107240966 107241025 - Gnathostomata Bilateria No 1
Cfa-Mir-153-P2 None MIR-153 UGCAUAG None None TRACE1933465398 394 453 - Gnathostomata Bilateria No 1
Cli-Mir-153-P2 cli-mir-153a MIR-153 UGCAUAG MIMAT0038545 MIMAT0038546 scaffold32 1622023 1622081 - Gnathostomata Bilateria No 1
Cmi-Mir-153-P2 None MIR-153 UGCAUAG None None KI636142.1 175318 175376 - Gnathostomata Bilateria No 1
Cpi-Mir-153-P2 cpi-mir-153-1 MIR-153 UGCAUAG MIMAT0037787 MIMAT0037788 JH584422 341987 342045 + Gnathostomata Bilateria No 1 1
Dno-Mir-153-P2 dno-mir-153a MIR-153 UGCAUAG MIMAT0047679 MIMAT0047680 JH569916 829795 829854 - Gnathostomata Bilateria No 1
Gga-Mir-153-P2 None MIR-153 UGCAUAG None None 7 22192593 22192651 + Gnathostomata Bilateria No 1
Gja-Mir-153-P2 None MIR-153 UGCAUAG None None NW_015176454.1 1405217 1405275 - Gnathostomata Bilateria No 1
Hsa-Mir-153-P2 hsa-mir-153-1 MIR-153 UGCAUAG None MIMAT0000439 chr2 219294126 219294185 - Gnathostomata Bilateria No 1
Lch-Mir-153-P2 None MIR-153 UGCAUAG None None JH128459.1 192280 192340 + Gnathostomata Bilateria Unknown 1
Loc-Mir-153-P2 None MIR-153 UGCAUAG None None LG12 30822159 30822218 + Gnathostomata Bilateria No 1
Mdo-Mir-153-P2 mdo-mir-153-1 MIR-153 UGCAUAG MIMAT0031108 MIMAT0012738 7 173335359 173335418 + Gnathostomata Bilateria No 1
Mml-Mir-153-P2 mml-mir-153-1 MIR-153 UGCAUAG MIMAT0026569 MIMAT0002271 chr12 101425508 101425567 - Gnathostomata Bilateria No 1
Oan-Mir-153-P2 oan-mir-153-1 MIR-153 UGCAUAG MIMAT0007004 MIMAT0007005 NC_041728.1 181850150 181850210 - Gnathostomata Bilateria No 1
Pbv-Mir-153-P2 pbv-mir-153-2 MIR-153 UGCAUAG MIMAT0038972 MIMAT0038971 KE952971.1 377759 377817 + Gnathostomata Bilateria No 1
Sha-Mir-153-P2 None MIR-153 UGCAUAG None None GL849891.1 1182396 1182455 + Gnathostomata Bilateria No 1
Spt-Mir-153-P2 None MIR-153 UGCAUAG None None QEPC01002394.1 550573 550632 - Gnathostomata Bilateria No 1
Sto-Mir-153-P2 None MIR-153 UGCAUAG None None BFAA01010745.1 49391 49451 + Gnathostomata Bilateria No 1
Tgu-Mir-153-P2 tgu-mir-153-2 MIR-153 UGCAUAG MIMAT0031022 MIMAT0014552 7 10362074 10362132 - Gnathostomata Bilateria No 1
Xtr-Mir-153-P2 xtr-mir-153-1 MIR-153 UGCAUAG None MIMAT0003607 chr9 78533754 78533813 + Gnathostomata Bilateria No 1 1
Dre-Mir-153-P2a dre-mir-153c MIR-153 UGCAUAG MIMAT0031979 MIMAT0001850 chr9 7612418 7612477 + Clupeocephala Bilateria No 1
Gmo-Mir-153-P2a gmo-mir-153b MIR-153 UGCAUAG MIMAT0044117 MIMAT0044118 GeneScaffold_1359 207512 207571 + Clupeocephala Bilateria No
Mal-Mir-153-P2a None MIR-153 UGCAUAG None None KV884776.1 468971 469030 + Clupeocephala Bilateria No
Tni-Mir-153-P2a tni-mir-153b MIR-153 UGCAUAG None MIMAT0003002 2 15371791 15371849 + Clupeocephala Bilateria No
Mal-Mir-153-P2b None MIR-153 UGCAUAG None None KV884704.1 299430 299488 + Clupeocephala Bilateria No 1
Tni-Mir-153-P2b None MIR-153 UGCAUAG None None 3 991154 991212 + Clupeocephala Bilateria No 1
Xla-Mir-153-P2c None MIR-153 UGCAUAG None None NC_030740.1 51410565 51410624 - X. laevis Bilateria No 1 1
Xla-Mir-153-P2d None MIR-153 UGCAUAG None None NC_030740.1 51410565 51410624 - X. laevis Bilateria No 1 1
Cmi-Mir-153-P4 None MIR-153 UGCAUAG None None KI636116.1 298946 299005 - Gnathostomata Bilateria No 1
Sto-Mir-153-P4 None MIR-153 UGCAUAG None None BFAA01021138.1 3053 3112 + Gnathostomata Bilateria No
Ebu-Mir-153-P5 None MIR-153 UGCAUAG None None FYBX02010433.1 28628 28686 + E. burgeri Bilateria Unknown
Ebu-Mir-153-P6 None MIR-153 UGCAUAG None None FYBX02010558.1 199410 199470 + E. burgeri Bilateria Unknown 1
Ebu-Mir-153-P7 None MIR-153 UGCAUAG None None FYBX02009588.1 1240785 1240843 - E. burgeri Bilateria Unknown 1
Efe-Mir-153-P8 None MIR-153 UGCAUAG None None Efet.01.60561 1490 1548 - E. fetida Bilateria No 1
Efe-Mir-153-P9 None MIR-153 UGCAUAG None None Efet.01.33572 2693 2749 - E. fetida Bilateria No 1
Lpo-Mir-153-P10 None MIR-153 UGCAUAG None None NW_013665839.1 427255 427311 - L. polyphemus Bilateria No
Lpo-Mir-153-P11 None MIR-153 UGCAUAG None None NW_013685978.1 86 142 + L. polyphemus Bilateria No 1
Lpo-Mir-153-P12 None MIR-153 UGCAUAG None None NW_013666375.1 5345 5402 + L. polyphemus Bilateria No
Lpo-Mir-153-P13 None MIR-153 UGCAUAG None None NW_013679800.1 7240 7296 + L. polyphemus Bilateria No 1
Lpo-Mir-153-P14 None MIR-153 UGCAUAG None None NW_013672149.1 28785 28841 + L. polyphemus Bilateria No 1
Lpo-Mir-153-P15 None MIR-153 UGCAUAG None None NW_013667366.1 252182 252238 + L. polyphemus Bilateria Unknown 1 1
Csc-Mir-153-P16 None MIR-153 UGCAUAG None None NW_019384443.1 386667 386726 + C. sculpturatus Bilateria Unknown 1
Csc-Mir-153-P17a None MIR-153 UGCAUAG None None NW_019385909.1 125023 125080 + C. sculpturatus Bilateria Unknown
Csc-Mir-153-P17b None MIR-153 UGCAUAG None None NW_019385909.1 125554 125611 + C. sculpturatus Bilateria Unknown 1
Esc-Mir-153-P18a None MIR-153 UGCAUAG None None Esc-Mir-153-P18b_pre_SRIE01043446.1:32-175 44 101 - E. scolopes Bilateria No 1
Esc-Mir-153-P18b None MIR-153 UGCAUAG None None Esc-Mir-153-P18b_pre_SRIE01043446.1:16208-16351 44 101 - E. scolopes Bilateria No 1
Bfl-Mir-2061 bfl-mir-2061 MIR-2061 UGCAUAG None MIMAT0009987 NC_049984.1 7654702 7654760 - Branchiostoma Branchiostoma No 1 1
Bla-Mir-2061 None MIR-2061 UGCAUAG None None Sc0000005 2547635 2547693 - Branchiostoma Branchiostoma No 1 1
Cin-Mir-4043 cin-mir-4043 MIR-4043 UGCAUAG MIMAT0016575 MIMAT0016576 14 1118678 1118734 - C. intestinalis C. intestinalis No 1 1

Download sequences for: precursor | 5p | 3p | mature | star | mature/star | loop | extend_pre | all