MirGeneDB 3.0
MirGeneDB ID

Esc-Mir-153-P18a

Family name MIR-153 (all species)
Species Hawaiian bobtail squid (Euprymna scolopes)
MiRBase ID
Paralogues Esc-Mir-153-P18b 
Orthologues Agr-Mir-153  Asu-Mir-153  Bfl-Mir-153  Bko-Mir-153  Bla-Mir-153  Bpl-Mir-153  Cin-Mir-153  Csc-Mir-153-P18  Cte-Mir-153  Dgr-Mir-153  Dma-Mir-153  Dpu-Mir-153  Eba-Mir-153  Egr-Mir-153  Gsa-Mir-153  Gsp-Mir-153  Hmi-Mir-153  Hru-Mir-153  Isc-Mir-153  Lan-Mir-153  Lgi-Mir-153  Llo-Mir-153  Mgi-Mir-153  Mom-Mir-153  Npo-Mir-153  Obi-Mir-153  Ofu-Mir-153  Ovu-Mir-153  Pau-Mir-153  Pca-Mir-153  Pcr-Mir-153  Pdu-Mir-153  Pfl-Mir-153  Pmi-Mir-153  Pve-Mir-153  Rph-Mir-153  Sko-Mir-153  Sme-Mir-153  Snu-Mir-153  Spu-Mir-153  Tur-Mir-153  War-Mir-153  Xbo-Mir-153 
Node of Origin (locus) E. scolopes
Node of Origin (family) Bilateria
Genome context
(esc-GCA_024364805.1_ASM2436480v1)		 CM044498.1: 49351421-49351478 [+] Ensembl
Clustered miRNAs
(< 50kb from Mir-153-P18a)		 Mir-153-P18a CM044498.1: 49351421-49351478 [+] Ensembl
Mir-153-P18b CM044498.1: 49351421-49351478 [+] Ensembl
Seed UGCAUAG
Precursor
(pre-Mir +30nt flank)		 
UUAUUGGCACUUACUUAUCAGUGAACCUGAAAGCUUUUGUGAUUUAGCGAUUGUAGACUUAACUAAUUGCAUAGUCACAAAAGUGAUCGGGAUGCUGACAAUCUCUACUAAUCUCUUG
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Structure
        10           20        30        40        50        
UUAUUGGCACUUACUUA---|    GAA     AA            UA      GUAGA 
                    UCAGU   CCUGA  GCUUUUGUGAUU  GCGAUU     C
                    AGUCG   GGGCU  UGAAAACACUGA  CGUUAA     U
GUUCUCUAAUCAUCUCUAAC^    UA-     AG            UA      UCAAU 
      110       100         90        80        70        60
Deep sequencing
CommentThere is a second Dicer cut +1 on both arms.
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
Li
Star sequence

Esc-Mir-153-P18a_5p*
mirBase accessionNone
Sequence 
0- AAGCUUUUGUGAUUUAGCGAUU -22
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Mature sequence

Esc-Mir-153-P18a_3p
mirBase accessionNone
Sequence 
36- UUGCAUAGUCACAAAAGUGAUC -58
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