MirGeneDB 2.1
MirGeneDB ID

Bfl-Mir-153

Family name MIR-153 (all species)
Seed UGCAUAG
Species Florida lancelet (Branchiostoma floridae)
MiRBase ID bfl-mir-153
Paralogues
Orthologues Aca-Mir-153-P1  Aca-Mir-153-P2  Ami-Mir-153-P1  Ami-Mir-153-P2  Asu-Mir-153  Bge-Mir-153-P16  Bge-Mir-153-P17  Bla-Mir-153  Bpl-Mir-153  Bta-Mir-153-P1  Bta-Mir-153-P2  Cfa-Mir-153-P1  Cfa-Mir-153-P2  Cgi-Mir-153  Cin-Mir-153  Cli-Mir-153-P1  Cli-Mir-153-P2  Cmi-Mir-153-P1  Cmi-Mir-153-P2  Cmi-Mir-153-P4  Cpi-Mir-153-P1  Cpi-Mir-153-P2  Cpo-Mir-153-P1  Csc-Mir-153-P16  Csc-Mir-153-P17a  Csc-Mir-153-P17b  Cte-Mir-153  Dma-Mir-153  Dno-Mir-153-P1  Dno-Mir-153-P2  Dpu-Mir-153  Dre-Mir-153-P1a  Dre-Mir-153-P2a  Dre-Mir-153-P2b  Ebu-Mir-153-P5  Ebu-Mir-153-P6  Ebu-Mir-153-P7  Efe-Mir-153-P8  Efe-Mir-153-P9  Esc-Mir-153-P18a  Esc-Mir-153-P18b  Ete-Mir-153-P1  Gga-Mir-153-P1  Gga-Mir-153-P2  Gja-Mir-153-P1  Gja-Mir-153-P2  Gmo-Mir-153-P1a  Gmo-Mir-153-P1b  Gmo-Mir-153-P2a  Hsa-Mir-153-P1  Hsa-Mir-153-P2  Isc-Mir-153  Lan-Mir-153  Lch-Mir-153-P1  Lch-Mir-153-P2  Lgi-Mir-153  Loc-Mir-153-P1  Loc-Mir-153-P2  Lpo-Mir-153-P10  Lpo-Mir-153-P11  Lpo-Mir-153-P12  Lpo-Mir-153-P13  Lpo-Mir-153-P14  Lpo-Mir-153-P15  Mal-Mir-153-P1a  Mal-Mir-153-P1b  Mal-Mir-153-P2a  Mal-Mir-153-P2b  Mdo-Mir-153-P1  Mdo-Mir-153-P2  Mml-Mir-153-P1  Mml-Mir-153-P2  Mmu-Mir-153-P1  Mun-Mir-153-P1  Mun-Mir-153-P2  Npo-Mir-153  Oan-Mir-153-P1  Oan-Mir-153-P2  Obi-Mir-153  Ocu-Mir-153-P1  Ovu-Mir-153  Pbv-Mir-153-P1  Pbv-Mir-153-P2  Pfl-Mir-153  Pma-Mir-153-o1  Pma-Mir-153-o2  Pma-Mir-153-o3  Pmi-Mir-153  Rno-Mir-153-P1  Sha-Mir-153-P1  Sha-Mir-153-P2  Sko-Mir-153  Sme-Mir-153  Spt-Mir-153-P1  Spt-Mir-153-P2  Spu-Mir-153  Sto-Mir-153-P1  Sto-Mir-153-P2  Sto-Mir-153-P4  Tgu-Mir-153-P1  Tgu-Mir-153-P2  Tni-Mir-153-P1b  Tni-Mir-153-P2a  Tni-Mir-153-P2b  Xbo-Mir-153  Xla-Mir-153-P1c  Xla-Mir-153-P1d  Xla-Mir-153-P2c  Xla-Mir-153-P2d  Xtr-Mir-153-P1  Xtr-Mir-153-P2 
Node of Origin (locus) Bilateria
Node of Origin (family) Bilateria
Genome context
(GCF_000003815.2_Bfl_VNyyK_genomic)		 NC_049988.1: 729633-729692 [+] UCSC
Precursor
(pre-Mir +30nt flank)
UCGUUACCUUGACCUCUUUGCAGGUGGCUGCCAUUUUUGCGACCUUGCAACUGUUCGAUGACCUCUGGUUGCAUAGUCUCAAAAGUGACAUCCUUCUUGUAACCUCUCAACUUUCCCAGC
Get precursor sequence
Structure
        10         20         30        40        50         
UCGUUACCUUGACCUCU-       U-| C  C        C   CU       GUUCGA 
                  UUGCAGG  GG UG CAUUUUUG GAC  UGCAACU      U
                  AAUGUUC  CC AC GUGAAAAC CUG  ACGUUGG      G
CGACCCUUUCAACUCUCC       UU^ U  A        U   AU       UCUCCA 
.       110       100        90        80        70        60
Deep sequencing
3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
-   +
To
Star sequence

Bfl-Mir-153_5p* (predicted)
mirBase accessionNone
Sequence 
0- CCAUUUUUGCGACCUUGCAACU -22
Get sequence
Mature sequence

Bfl-Mir-153_3p (predicted)
mirBase accessionMIMAT0025391
Sequence 
38- UUGCAUAGUCUCAAAAGUGACA -60
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