MirGeneDB 3.0
MirGeneDB ID

Pma-Mir-153-o2

Family name MIR-153 (all species)
Species Sea Lamprey (Petromyzon marinus)
MiRBase ID pma-mir-153-2
Paralogues Pma-Mir-153-o1  Pma-Mir-153-o3 
Orthologues Aca-Mir-153-P2  Agr-Mir-153  Ami-Mir-153-P2  Asu-Mir-153  Bfl-Mir-153  Bko-Mir-153  Bla-Mir-153  Bpl-Mir-153  Bta-Mir-153-P2  Cfa-Mir-153-P2  Cin-Mir-153  Cja-Mir-153-P2  Cli-Mir-153-P2  Cmi-Mir-153-P2  Cpi-Mir-153-P2  Cte-Mir-153  Dgr-Mir-153  Dma-Mir-153  Dno-Mir-153-P2  Dpu-Mir-153  Dre-Mir-153-P2a  Dre-Mir-153-P2b  Eba-Mir-153  Eca-Mir-153-P2  Egr-Mir-153  Gga-Mir-153-P2  Gja-Mir-153-P2  Gmo-Mir-153-P2a  Gsa-Mir-153  Gsp-Mir-153  Hmi-Mir-153  Hru-Mir-153  Hsa-Mir-153-P2  Isc-Mir-153  Laf-Mir-153-P2  Lan-Mir-153  Lch-Mir-153-P2  Lgi-Mir-153  Llo-Mir-153  Loc-Mir-153-P2  Mal-Mir-153-P2a  Mal-Mir-153-P2b  Mdo-Mir-153-P2  Mgi-Mir-153  Mml-Mir-153-P2  Mmr-Mir-153-P2  Mom-Mir-153  Mun-Mir-153-P2  Neu-Mir-153-P2  Npo-Mir-153  Oan-Mir-153-P2  Obi-Mir-153  Ofu-Mir-153  Ovu-Mir-153  Pab-Mir-153-P2  Pau-Mir-153  Pbv-Mir-153-P2  Pca-Mir-153  Pcr-Mir-153  Pdu-Mir-153  Pfl-Mir-153  Pmi-Mir-153  Pve-Mir-153  Rph-Mir-153  Sha-Mir-153-P2  Sko-Mir-153  Sme-Mir-153  Snu-Mir-153  Spt-Mir-153-P2  Spu-Mir-153  Sto-Mir-153-P2  Tgu-Mir-153-P2  Tni-Mir-153-P2a  Tni-Mir-153-P2b  Tur-Mir-153  War-Mir-153  Xbo-Mir-153  Xla-Mir-153-P2c  Xla-Mir-153-P2d  Xtr-Mir-153-P2 
Node of Origin (locus) P. marinus
Node of Origin (family) Bilateria
Genome context
(GCF_010993605.1_kPetMar1.pri_genomic)		 NC_046087.1: 10331164-10331225 [+] UCSC Ensembl
Seed UGCAUAG
Precursor
(pre-Mir +30nt flank)		 
ACGACGCCUGCAAACGUGCCGGCGGCUGAUGUCAUUUUUGUGAUUUGCAACUCGUUUUACGUGUGAAGUUGCAUAGUCACAAAAGUGAUCAUCAGAGGCCUGGGGCCCUGCCAGCAAAGCAU
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Structure
        10         20         30         40         50         
ACGACGCCUGCAAACGUG-  -   GG      -              -|      CGUUUU 
                   CC GGC  CUGAUG UCAUUUUUGUGAUU UGCAACU      A
                   GG CCG  GACUAC AGUGAAAACACUGA ACGUUGA      C
UACGAAACGACCGUCCCGG  U   GA      U              U^      AGUGUG 
120       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
- +
Br Gi Gu He Ki La Li Mo Mu Sk
Star sequence

Pma-Mir-153-o2_5p*
mirBase accessionNone
Sequence 
0- GUCAUUUUUGUGAUUUGCAACU -22
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Mature sequence

Pma-Mir-153-o2_3p
mirBase accessionMIMAT0019484
Sequence 
38- UUGCAUAGUCACAAAAGUGAUCAU -62
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