| MirGeneDB ID | Cmi-Mir-153-P2 |
|---|
| Family name |
MIR-153 (all species) |
|---|
| Seed |
UGCAUAG |
|---|
| Species |
Australian ghostshark (Callorhinchus milii) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
Cmi-Mir-153-P1
Cmi-Mir-153-P4
|
|---|
| Orthologues |
Aca-Mir-153-P2
Ami-Mir-153-P2
Asu-Mir-153
Bfl-Mir-153
Bla-Mir-153
Bpl-Mir-153
Bta-Mir-153-P2
Cfa-Mir-153-P2
Cgi-Mir-153
Cin-Mir-153
Cli-Mir-153-P2
Cpi-Mir-153-P2
Cte-Mir-153
Dma-Mir-153
Dno-Mir-153-P2
Dpu-Mir-153
Dre-Mir-153-P2a
Dre-Mir-153-P2b
Gga-Mir-153-P2
Gja-Mir-153-P2
Gmo-Mir-153-P2a
Hsa-Mir-153-P2
Isc-Mir-153
Lan-Mir-153
Lch-Mir-153-P2
Lgi-Mir-153
Loc-Mir-153-P2
Mal-Mir-153-P2a
Mal-Mir-153-P2b
Mdo-Mir-153-P2
Mml-Mir-153-P2
Mun-Mir-153-P2
Npo-Mir-153
Oan-Mir-153-P2
Obi-Mir-153
Ovu-Mir-153
Pbv-Mir-153-P2
Pfl-Mir-153
Pma-Mir-153-o2
Pmi-Mir-153
Sha-Mir-153-P2
Sko-Mir-153
Sme-Mir-153
Spt-Mir-153-P2
Spu-Mir-153
Sto-Mir-153-P2
Tgu-Mir-153-P2
Tni-Mir-153-P2a
Tni-Mir-153-P2b
Xbo-Mir-153
Xla-Mir-153-P2c
Xla-Mir-153-P2d
Xtr-Mir-153-P2
|
|---|
| Node of Origin (locus) |
Gnathostomata
|
|---|
| Node of Origin (family) |
Bilateria
|
|---|
Genome context
(GCA_000165045.2_Callorhinchus_milii-6.1.3) |
KI636142.1: 175318-175376 [-]
UCSC
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
GACACUCUCUCUCUCUCUCAGCUCUCAGUGUCAUUUUUGUGAUUUGCAGCUAGUAAUCUGGAUCCAGUUGCAUAGUCACAAAAGUGAUCAUUGGUGGUUGUGUCAGCACCGCCCGGCUC
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
GACACUCUCUCUCUCUCU- CU - -| AGUAAU
CAGCU CAGUG UCAUUUUUGUGAUU UGCAGCU C
GUUGG GUUAC AGUGAAAACACUGA ACGUUGA U
CUCGGCCCGCCACGACUGU UG U U^ CCUAGG
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | CNNC at 3p(+17) |
|---|
Tissue expression
|
| Bl |
Br |
Ey |
Gi |
Gl |
He |
In |
Ki |
Li |
Mu |
Ov |
Pa |
Sk |
Sp |
Te |
Ut |
| |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|---|
| Star sequence |
Cmi-Mir-153-P2_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- UCAUUUUUGUGAUUUGCAGCU -21
Get sequence
|
|---|
| Mature sequence |
Cmi-Mir-153-P2_3p |
| mirBase accession | None |
|---|
| Sequence |
37- UUGCAUAGUCACAAAAGUGAUC -59
Get sequence
|
|---|
