Mir-153-P7

MirGeneDB ID

Ebu-Mir-153-P7

Family name

MIR-153 (all species)

Species

Inshore hagfish (Eptatretus burgeri)

MiRBase ID

Paralogues

Ebu-Mir-153-P5 Ebu-Mir-153-P6

Orthologues

Agr-Mir-153 Asu-Mir-153 Bfl-Mir-153 Bko-Mir-153 Bla-Mir-153 Bpl-Mir-153 Cin-Mir-153 Cte-Mir-153 Dgr-Mir-153 Dma-Mir-153 Dpu-Mir-153 Eba-Mir-153 Egr-Mir-153 Gsa-Mir-153 Gsp-Mir-153 Hmi-Mir-153 Hru-Mir-153 Isc-Mir-153 Lan-Mir-153 Lgi-Mir-153 Llo-Mir-153 Mgi-Mir-153 Mom-Mir-153 Npo-Mir-153 Obi-Mir-153 Ofu-Mir-153 Ovu-Mir-153 Pau-Mir-153 Pca-Mir-153 Pcr-Mir-153 Pdu-Mir-153 Pfl-Mir-153 Pmi-Mir-153 Pve-Mir-153 Rph-Mir-153 Sko-Mir-153 Sme-Mir-153 Snu-Mir-153 Spu-Mir-153 Tur-Mir-153 War-Mir-153 Xbo-Mir-153

Node of Origin (locus)

E. burgeri

Node of Origin (family)

Bilateria

Genome context
(Eburgeri_3)

FYBX02009588.1: 1240785-1240843 [-] UCSC Ensembl

Seed

UGCAUAG

Precursor
(pre-Mir +30nt flank)

CAAAGGCAAAGAGACUUCCGGCCGCUGCUGUCAUUUUUGUGAUUUGCAGCUUGUUUAAUUAGUCAAGUUGCAUAGUCACAAAAGUGAUCAUUGGCGACUGUGACCCAAACUCAUCGCAU

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Structure

        10         20        30         40         50        
CAAAGGCAAAGAGACUUC-   C    GC  -              -|      UGUUUA 
                   CGG CGCU  UG UCAUUUUUGUGAUU UGCAGCU      A
                   GUC GCGG  AC AGUGAAAACACUGA ACGUUGA      U
UACGCUACUCAAACCCAGU   A    UU  U              U^      ACUGAU 
       110       100        90        80        70        60

Deep sequencing

3' NTU

Unknown

Motifs

UGUG in loop

Tissue expression

To

Star sequence

Ebu-Mir-153-P7_5p*

mirBase accession

None

Sequence

0- UCAUUUUUGUGAUUUGCAGCU -21

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Mature sequence

Ebu-Mir-153-P7_3p

mirBase accession

None

Sequence

37- UUGCAUAGUCACAAAAGUGAUC -59

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