MirGeneDB
57 microRNA genes with seed CAGUAGU
Sort by genome coordinates Motifs
MirGeneDB ID ▲ MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) 3' NTU  UG  UGUG CNNC
Aca-Mir-199-P1-v1 aca-mir-199b MIR-199 CAGUAGU MIMAT0021835 None GL343763.1 95918 95978 + Vertebrata Vertebrata No 1
Ami-Mir-199-P1-v1 ami-mir-199-3 MIR-199 CAGUAGU MIMAT0038216 MIMAT0038217 JH735267 249228 249288 - Vertebrata Vertebrata No 1
Bta-Mir-199-P1-v1 bta-mir-199b MIR-199 CAGUAGU MIMAT0003821 None chr11 98867681 98867741 - Vertebrata Vertebrata No
Cfa-Mir-199-P1-v1 cfa-mir-199-3 MIR-199 CAGUAGU None MIMAT0006642 chr9 55262353 55262413 + Vertebrata Vertebrata No
Cli-Mir-199-P1-v1 cli-mir-199-2 MIR-199 CAGUAGU MIMAT0038573 MIMAT0038574 scaffold835 50412 50472 + Vertebrata Vertebrata No 1
Cpi-Mir-199-P1-v1 cpi-mir-199-3 MIR-199 CAGUAGU MIMAT0037818 MIMAT0037819 JH584612 7627614 7627674 - Vertebrata Vertebrata No 1
Cpo-Mir-199-P1-v1 cpo-mir-199-3 MIR-199 CAGUAGU MIMAT0047088 MIMAT0047087 scaffold_27 3923324 3923384 + Vertebrata Vertebrata No
Dno-Mir-199-P1-v1 dno-mir-199-2 MIR-199 CAGUAGU MIMAT0047739 MIMAT0047738 JH564958 197356 197416 + Vertebrata Vertebrata No
Dre-Mir-199-P1-v1 dre-mir-199-2 MIR-199 CAGUAGU MIMAT0001277 MIMAT0003155 chr5 1376779 1376839 - Vertebrata Vertebrata No
Ete-Mir-199-P1-v1 None MIR-199 CAGUAGU None None JH980366 6396369 6396428 + Vertebrata Vertebrata No
Gga-Mir-199-P1-v1 gga-mir-199-1 MIR-199 CAGUAGU MIMAT0001152 MIMAT0003721 17 5571593 5571653 + Vertebrata Vertebrata No 1
Hsa-Mir-199-P1-v1 hsa-mir-199b MIR-199 CAGUAGU MIMAT0000263 MIMAT0004563 chr9 128244745 128244805 - Vertebrata Vertebrata No
Mdo-Mir-199-P1-v1 mdo-mir-199b-1 MIR-199 CAGUAGU MIMAT0004125 MIMAT0026678 1 453998873 453998933 - Vertebrata Vertebrata No
Mml-Mir-199-P1-v1 None MIR-199 CAGUAGU None None chr15 10637142 10637202 + Vertebrata Vertebrata No
Mmu-Mir-199-P1-v1 mmu-mir-199b MIR-199 CAGUAGU MIMAT0000672 MIMAT0004667 chr2 32318485 32318545 + Vertebrata Vertebrata No
Oan-Mir-199-P1-v1 None MIR-199 CAGUAGU None None NC_041731.1 32349237 32349297 + Vertebrata Vertebrata No
Ocu-Mir-199-P1-v1 None MIR-199 CAGUAGU None None 2005146567_corrected 71 131 - Vertebrata Vertebrata No
Rno-Mir-199-P1-v1 None MIR-199 CAGUAGU None None chr3 11348209 11348269 + Vertebrata Vertebrata No
Sha-Mir-199-P1-v1 None MIR-199 CAGUAGU None None GL838915.1 7112 7172 - Vertebrata Vertebrata No
Sto-Mir-199-P1-v1 None MIR-199 CAGUAGU None None BFAA01000443.1 504410 504470 - Vertebrata Vertebrata No
Tgu-Mir-199-P1-v1 tgu-mir-199-1 MIR-199 CAGUAGU MIMAT0014645 MIMAT0014617 17 5549806 5549866 + Vertebrata Vertebrata No 1
Aca-Mir-199-P2-v1 aca-mir-199a-1 MIR-199 CAGUAGU MIMAT0021834 None 2 80766239 80766301 - Vertebrata Vertebrata No 1
Ami-Mir-199-P2-v1 ami-mir-199-1 MIR-199 CAGUAGU MIMAT0038216 MIMAT0038217 JH733887 302762 302824 + Vertebrata Vertebrata No 1
Bta-Mir-199-P2-v1 bta-mir-199a-2 MIR-199 CAGUAGU MIMAT0003544 MIMAT0003746 chr7 16508929 16508991 - Vertebrata Vertebrata No 1
Cfa-Mir-199-P2-v1 cfa-mir-199-1 MIR-199 CAGUAGU None MIMAT0006642 chr20 50410923 50410985 + Vertebrata Vertebrata No 1
Cpi-Mir-199-P2-v1 cpi-mir-199-1 MIR-199 CAGUAGU MIMAT0037818 MIMAT0037819 JH584417 604979 605041 + Vertebrata Vertebrata No 1
Cpo-Mir-199-P2-v1 cpo-mir-199-1 MIR-199 CAGUAGU MIMAT0047086 MIMAT0047087 scaffold_226 180917 180979 - Vertebrata Vertebrata No 1
Dre-Mir-199-P2-v1 dre-mir-199-3 MIR-199 CAGUAGU MIMAT0001277 MIMAT0031922 chr3 47195159 47195219 - Vertebrata Vertebrata No
Ete-Mir-199-P2-v1 None MIR-199 CAGUAGU None None JH980426 1079700 1079760 + Vertebrata Vertebrata No 1
Hsa-Mir-199-P2-v1 hsa-mir-199a-1 MIR-199 CAGUAGU MIMAT0000231 MIMAT0000232 chr19 10817429 10817491 - Vertebrata Vertebrata No 1
Mdo-Mir-199-P2-v1 mdo-mir-199b-3 MIR-199 CAGUAGU MIMAT0031066 MIMAT0026678 3 430288133 430288195 + Vertebrata Vertebrata No 1
Mml-Mir-199-P2-v1 mml-mir-199a-2 MIR-199 CAGUAGU MIMAT0006231 MIMAT0006232 chr19 10858567 10858629 - Vertebrata Vertebrata No 1
Mmu-Mir-199-P2-v1 mmu-mir-199a-1 MIR-199 CAGUAGU MIMAT0000229 MIMAT0000230 chr9 21496498 21496559 - Vertebrata Vertebrata No 1
Ocu-Mir-199-P2-v1 ocu-mir-199a-1 MIR-199 CAGUAGU MIMAT0048319 MIMAT0048320 chrUn0216 201980 202042 + Vertebrata Vertebrata No 1
Sha-Mir-199-P2-v1 sha-mir-199a MIR-199 CAGUAGU None MIMAT0022785 GL841403.1 248965 249027 + Vertebrata Vertebrata No 1
Aca-Mir-199-P3-v1 aca-mir-199a-2 MIR-199 CAGUAGU MIMAT0021834 None AAWZ02037129 4079 4139 + Vertebrata Vertebrata No 1
Ami-Mir-199-P3-v1 ami-mir-199-2 MIR-199 CAGUAGU MIMAT0038216 MIMAT0038217 JH739065 229894 229954 + Vertebrata Vertebrata No 1
Bta-Mir-199-P3-v1 bta-mir-199a-1 MIR-199 CAGUAGU MIMAT0003544 MIMAT0003746 chr16 40491615 40491675 - Vertebrata Vertebrata No 1
Cfa-Mir-199-P3-v1 cfa-mir-199-2 MIR-199 CAGUAGU None MIMAT0006642 chr7 26812765 26812825 + Vertebrata Vertebrata No 1
Cli-Mir-199-P3-v1 cli-mir-199-1 MIR-199 CAGUAGU MIMAT0038573 MIMAT0038574 scaffold7 10450277 10450337 + Vertebrata Vertebrata No 1
Cpi-Mir-199-P3-v1 cpi-mir-199-2 MIR-199 CAGUAGU MIMAT0037818 MIMAT0037819 JH585174 227135 227195 - Vertebrata Vertebrata No 1
Cpo-Mir-199-P3-v1 cpo-mir-199-2 MIR-199 CAGUAGU MIMAT0047086 MIMAT0047087 scaffold_12 11462616 11462676 + Vertebrata Vertebrata No 1
Dno-Mir-199-P3-v1 dno-mir-199-1 MIR-199 CAGUAGU MIMAT0047737 MIMAT0047738 JH566029 1167422 1167482 - Vertebrata Vertebrata No 1
Dre-Mir-199-P3-v1 dre-mir-199-1 MIR-199 CAGUAGU MIMAT0001277 MIMAT0003155 chr20 14875474 14875534 + Vertebrata Vertebrata No 1
Ete-Mir-199-P3-v1 None MIR-199 CAGUAGU None None JH980318 26675833 26675893 + Vertebrata Vertebrata No 1
Gga-Mir-199-P3-v1 gga-mir-199-2 MIR-199 CAGUAGU MIMAT0001152 MIMAT0003721 8 4652492 4652552 + Vertebrata Vertebrata No 1
Hsa-Mir-199-P3-v1 hsa-mir-199a-2 MIR-199 CAGUAGU MIMAT0000231 MIMAT0000232 chr1 172144554 172144614 - Vertebrata Vertebrata No 1
Mdo-Mir-199-P3-v1 mdo-mir-199b-2 MIR-199 CAGUAGU MIMAT0031065 MIMAT0026678 2 64374174 64374234 - Vertebrata Vertebrata No 1
Mml-Mir-199-P3-v1 mml-mir-199a-1 MIR-199 CAGUAGU MIMAT0002531 None chr1 195412013 195412073 + Vertebrata Vertebrata No 1
Mmu-Mir-199-P3-v1 mmu-mir-199a-2 MIR-199 CAGUAGU MIMAT0000229 MIMAT0000230 chr1 162217844 162217904 + Vertebrata Vertebrata No 1
Oan-Mir-199-P3-v1 oan-mir-199 MIR-199 CAGUAGU MIMAT0007172 MIMAT0007173 NC_041743.1 5356219 5356279 - Vertebrata Vertebrata No 1
Ocu-Mir-199-P3-v1 ocu-mir-199a-2 MIR-199 CAGUAGU MIMAT0048319 MIMAT0048320 chr13 20628416 20628476 + Vertebrata Vertebrata No 1
Rno-Mir-199-P3-v1 rno-mir-199a MIR-199 CAGUAGU MIMAT0000872 MIMAT0004738 chr13 80125517 80125577 + Vertebrata Vertebrata No 1
Sha-Mir-199-P3-v1 None MIR-199 CAGUAGU None None GL856751.1 2995432 2995492 - Vertebrata Vertebrata No 1
Sto-Mir-199-P3-v1 None MIR-199 CAGUAGU None None BFAA01007060.1 135645 135705 + Vertebrata Vertebrata No 1
Tgu-Mir-199-P3-v1 tgu-mir-199-2 MIR-199 CAGUAGU MIMAT0014645 MIMAT0014617 8_random 1629774 1629834 + Vertebrata Vertebrata No 1
Xtr-Mir-199-P3-v1 xtr-mir-199a MIR-199 CAGUAGU MIMAT0003618 MIMAT0003619 KB021653 70171814 70171874 + Vertebrata Vertebrata No 1

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