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57 microRNA genes with seed CAGUAGU
Sort by genome coordinates
Motifs
MirGeneDB ID
▲
MiRBase ID
Family
Seed
5p accession
3p accession
Chromosome
Start
End
Strand
Node of origin (locus)
Node of origin (family)
3' NTU
UG
UGUG
CNNC
Aca-Mir-199-P1-v1
aca-mir-199b
MIR-199
CAGUAGU
MIMAT0021835
None
GL343763.1
95918
95978
+
Vertebrata
Vertebrata
No
1
Ami-Mir-199-P1-v1
ami-mir-199-3
MIR-199
CAGUAGU
MIMAT0038216
MIMAT0038217
JH735267
249228
249288
-
Vertebrata
Vertebrata
No
1
Bta-Mir-199-P1-v1
bta-mir-199b
MIR-199
CAGUAGU
MIMAT0003821
None
chr11
98867681
98867741
-
Vertebrata
Vertebrata
No
Cfa-Mir-199-P1-v1
cfa-mir-199-3
MIR-199
CAGUAGU
None
MIMAT0006642
chr9
55262353
55262413
+
Vertebrata
Vertebrata
No
Cli-Mir-199-P1-v1
cli-mir-199-2
MIR-199
CAGUAGU
MIMAT0038573
MIMAT0038574
scaffold835
50412
50472
+
Vertebrata
Vertebrata
No
1
Cpi-Mir-199-P1-v1
cpi-mir-199-3
MIR-199
CAGUAGU
MIMAT0037818
MIMAT0037819
JH584612
7627614
7627674
-
Vertebrata
Vertebrata
No
1
Cpo-Mir-199-P1-v1
cpo-mir-199-3
MIR-199
CAGUAGU
MIMAT0047088
MIMAT0047087
scaffold_27
3923324
3923384
+
Vertebrata
Vertebrata
No
Dno-Mir-199-P1-v1
dno-mir-199-2
MIR-199
CAGUAGU
MIMAT0047739
MIMAT0047738
JH564958
197356
197416
+
Vertebrata
Vertebrata
No
Dre-Mir-199-P1-v1
dre-mir-199-2
MIR-199
CAGUAGU
MIMAT0001277
MIMAT0003155
chr5
1376779
1376839
-
Vertebrata
Vertebrata
No
Ete-Mir-199-P1-v1
None
MIR-199
CAGUAGU
None
None
JH980366
6396369
6396428
+
Vertebrata
Vertebrata
No
Gga-Mir-199-P1-v1
gga-mir-199-1
MIR-199
CAGUAGU
MIMAT0001152
MIMAT0003721
17
5571593
5571653
+
Vertebrata
Vertebrata
No
1
Hsa-Mir-199-P1-v1
hsa-mir-199b
MIR-199
CAGUAGU
MIMAT0000263
MIMAT0004563
chr9
128244745
128244805
-
Vertebrata
Vertebrata
No
Mdo-Mir-199-P1-v1
mdo-mir-199b-1
MIR-199
CAGUAGU
MIMAT0004125
MIMAT0026678
1
453998873
453998933
-
Vertebrata
Vertebrata
No
Mml-Mir-199-P1-v1
None
MIR-199
CAGUAGU
None
None
chr15
10637142
10637202
+
Vertebrata
Vertebrata
No
Mmu-Mir-199-P1-v1
mmu-mir-199b
MIR-199
CAGUAGU
MIMAT0000672
MIMAT0004667
chr2
32318485
32318545
+
Vertebrata
Vertebrata
No
Oan-Mir-199-P1-v1
None
MIR-199
CAGUAGU
None
None
NC_041731.1
32349237
32349297
+
Vertebrata
Vertebrata
No
Ocu-Mir-199-P1-v1
None
MIR-199
CAGUAGU
None
None
2005146567_corrected
71
131
-
Vertebrata
Vertebrata
No
Rno-Mir-199-P1-v1
None
MIR-199
CAGUAGU
None
None
chr3
11348209
11348269
+
Vertebrata
Vertebrata
No
Sha-Mir-199-P1-v1
None
MIR-199
CAGUAGU
None
None
GL838915.1
7112
7172
-
Vertebrata
Vertebrata
No
Sto-Mir-199-P1-v1
None
MIR-199
CAGUAGU
None
None
BFAA01000443.1
504410
504470
-
Vertebrata
Vertebrata
No
Tgu-Mir-199-P1-v1
tgu-mir-199-1
MIR-199
CAGUAGU
MIMAT0014645
MIMAT0014617
17
5549806
5549866
+
Vertebrata
Vertebrata
No
1
Aca-Mir-199-P2-v1
aca-mir-199a-1
MIR-199
CAGUAGU
MIMAT0021834
None
2
80766239
80766301
-
Vertebrata
Vertebrata
No
1
Ami-Mir-199-P2-v1
ami-mir-199-1
MIR-199
CAGUAGU
MIMAT0038216
MIMAT0038217
JH733887
302762
302824
+
Vertebrata
Vertebrata
No
1
Bta-Mir-199-P2-v1
bta-mir-199a-2
MIR-199
CAGUAGU
MIMAT0003544
MIMAT0003746
chr7
16508929
16508991
-
Vertebrata
Vertebrata
No
1
Cfa-Mir-199-P2-v1
cfa-mir-199-1
MIR-199
CAGUAGU
None
MIMAT0006642
chr20
50410923
50410985
+
Vertebrata
Vertebrata
No
1
Cpi-Mir-199-P2-v1
cpi-mir-199-1
MIR-199
CAGUAGU
MIMAT0037818
MIMAT0037819
JH584417
604979
605041
+
Vertebrata
Vertebrata
No
1
Cpo-Mir-199-P2-v1
cpo-mir-199-1
MIR-199
CAGUAGU
MIMAT0047086
MIMAT0047087
scaffold_226
180917
180979
-
Vertebrata
Vertebrata
No
1
Dre-Mir-199-P2-v1
dre-mir-199-3
MIR-199
CAGUAGU
MIMAT0001277
MIMAT0031922
chr3
47195159
47195219
-
Vertebrata
Vertebrata
No
Ete-Mir-199-P2-v1
None
MIR-199
CAGUAGU
None
None
JH980426
1079700
1079760
+
Vertebrata
Vertebrata
No
1
Hsa-Mir-199-P2-v1
hsa-mir-199a-1
MIR-199
CAGUAGU
MIMAT0000231
MIMAT0000232
chr19
10817429
10817491
-
Vertebrata
Vertebrata
No
1
Mdo-Mir-199-P2-v1
mdo-mir-199b-3
MIR-199
CAGUAGU
MIMAT0031066
MIMAT0026678
3
430288133
430288195
+
Vertebrata
Vertebrata
No
1
Mml-Mir-199-P2-v1
mml-mir-199a-2
MIR-199
CAGUAGU
MIMAT0006231
MIMAT0006232
chr19
10858567
10858629
-
Vertebrata
Vertebrata
No
1
Mmu-Mir-199-P2-v1
mmu-mir-199a-1
MIR-199
CAGUAGU
MIMAT0000229
MIMAT0000230
chr9
21496498
21496559
-
Vertebrata
Vertebrata
No
1
Ocu-Mir-199-P2-v1
ocu-mir-199a-1
MIR-199
CAGUAGU
MIMAT0048319
MIMAT0048320
chrUn0216
201980
202042
+
Vertebrata
Vertebrata
No
1
Sha-Mir-199-P2-v1
sha-mir-199a
MIR-199
CAGUAGU
None
MIMAT0022785
GL841403.1
248965
249027
+
Vertebrata
Vertebrata
No
1
Aca-Mir-199-P3-v1
aca-mir-199a-2
MIR-199
CAGUAGU
MIMAT0021834
None
AAWZ02037129
4079
4139
+
Vertebrata
Vertebrata
No
1
Ami-Mir-199-P3-v1
ami-mir-199-2
MIR-199
CAGUAGU
MIMAT0038216
MIMAT0038217
JH739065
229894
229954
+
Vertebrata
Vertebrata
No
1
Bta-Mir-199-P3-v1
bta-mir-199a-1
MIR-199
CAGUAGU
MIMAT0003544
MIMAT0003746
chr16
40491615
40491675
-
Vertebrata
Vertebrata
No
1
Cfa-Mir-199-P3-v1
cfa-mir-199-2
MIR-199
CAGUAGU
None
MIMAT0006642
chr7
26812765
26812825
+
Vertebrata
Vertebrata
No
1
Cli-Mir-199-P3-v1
cli-mir-199-1
MIR-199
CAGUAGU
MIMAT0038573
MIMAT0038574
scaffold7
10450277
10450337
+
Vertebrata
Vertebrata
No
1
Cpi-Mir-199-P3-v1
cpi-mir-199-2
MIR-199
CAGUAGU
MIMAT0037818
MIMAT0037819
JH585174
227135
227195
-
Vertebrata
Vertebrata
No
1
Cpo-Mir-199-P3-v1
cpo-mir-199-2
MIR-199
CAGUAGU
MIMAT0047086
MIMAT0047087
scaffold_12
11462616
11462676
+
Vertebrata
Vertebrata
No
1
Dno-Mir-199-P3-v1
dno-mir-199-1
MIR-199
CAGUAGU
MIMAT0047737
MIMAT0047738
JH566029
1167422
1167482
-
Vertebrata
Vertebrata
No
1
Dre-Mir-199-P3-v1
dre-mir-199-1
MIR-199
CAGUAGU
MIMAT0001277
MIMAT0003155
chr20
14875474
14875534
+
Vertebrata
Vertebrata
No
1
Ete-Mir-199-P3-v1
None
MIR-199
CAGUAGU
None
None
JH980318
26675833
26675893
+
Vertebrata
Vertebrata
No
1
Gga-Mir-199-P3-v1
gga-mir-199-2
MIR-199
CAGUAGU
MIMAT0001152
MIMAT0003721
8
4652492
4652552
+
Vertebrata
Vertebrata
No
1
Hsa-Mir-199-P3-v1
hsa-mir-199a-2
MIR-199
CAGUAGU
MIMAT0000231
MIMAT0000232
chr1
172144554
172144614
-
Vertebrata
Vertebrata
No
1
Mdo-Mir-199-P3-v1
mdo-mir-199b-2
MIR-199
CAGUAGU
MIMAT0031065
MIMAT0026678
2
64374174
64374234
-
Vertebrata
Vertebrata
No
1
Mml-Mir-199-P3-v1
mml-mir-199a-1
MIR-199
CAGUAGU
MIMAT0002531
None
chr1
195412013
195412073
+
Vertebrata
Vertebrata
No
1
Mmu-Mir-199-P3-v1
mmu-mir-199a-2
MIR-199
CAGUAGU
MIMAT0000229
MIMAT0000230
chr1
162217844
162217904
+
Vertebrata
Vertebrata
No
1
Oan-Mir-199-P3-v1
oan-mir-199
MIR-199
CAGUAGU
MIMAT0007172
MIMAT0007173
NC_041743.1
5356219
5356279
-
Vertebrata
Vertebrata
No
1
Ocu-Mir-199-P3-v1
ocu-mir-199a-2
MIR-199
CAGUAGU
MIMAT0048319
MIMAT0048320
chr13
20628416
20628476
+
Vertebrata
Vertebrata
No
1
Rno-Mir-199-P3-v1
rno-mir-199a
MIR-199
CAGUAGU
MIMAT0000872
MIMAT0004738
chr13
80125517
80125577
+
Vertebrata
Vertebrata
No
1
Sha-Mir-199-P3-v1
None
MIR-199
CAGUAGU
None
None
GL856751.1
2995432
2995492
-
Vertebrata
Vertebrata
No
1
Sto-Mir-199-P3-v1
None
MIR-199
CAGUAGU
None
None
BFAA01007060.1
135645
135705
+
Vertebrata
Vertebrata
No
1
Tgu-Mir-199-P3-v1
tgu-mir-199-2
MIR-199
CAGUAGU
MIMAT0014645
MIMAT0014617
8_random
1629774
1629834
+
Vertebrata
Vertebrata
No
1
Xtr-Mir-199-P3-v1
xtr-mir-199a
MIR-199
CAGUAGU
MIMAT0003618
MIMAT0003619
KB021653
70171814
70171874
+
Vertebrata
Vertebrata
No
1
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