MirGeneDB

MirGeneDB ID

Mml-Mir-199-P2-v1

Family name MIR-199 (all species)
Seed CAGUAGU
Species Rhesus monkey (Macaca mulatta)
MiRBase ID mml-mir-199a-2
Paralogues Mml-Mir-199-P1-v1  Mml-Mir-199-P1-v2  Mml-Mir-199-P1-v3  Mml-Mir-199-P2-v2  Mml-Mir-199-P2-v3  Mml-Mir-199-P3-v1  Mml-Mir-199-P3-v2  Mml-Mir-199-P3-v3 
Orthologues Aca-Mir-199-P2-v1  Aca-Mir-199-P2-v2  Aca-Mir-199-P2-v3  Ami-Mir-199-P2-v1  Ami-Mir-199-P2-v2  Ami-Mir-199-P2-v3  Bta-Mir-199-P2-v1  Bta-Mir-199-P2-v2  Bta-Mir-199-P2-v3  Cfa-Mir-199-P2-v1  Cfa-Mir-199-P2-v2  Cfa-Mir-199-P2-v3  Cpi-Mir-199-P2-v1  Cpi-Mir-199-P2-v2  Cpi-Mir-199-P2-v3  Cpo-Mir-199-P2-v1  Cpo-Mir-199-P2-v2  Cpo-Mir-199-P2-v3  Dre-Mir-199-P2-v1  Dre-Mir-199-P2-v2  Dre-Mir-199-P2-v3  Ete-Mir-199-P2-v1  Ete-Mir-199-P2-v2  Ete-Mir-199-P2-v3  Hsa-Mir-199-P2-v1  Hsa-Mir-199-P2-v2  Hsa-Mir-199-P2-v3  Mdo-Mir-199-P2-v1  Mdo-Mir-199-P2-v2  Mdo-Mir-199-P2-v3  Mmu-Mir-199-P2-v1  Mmu-Mir-199-P2-v2  Mmu-Mir-199-P2-v3  Ocu-Mir-199-P2-v1  Ocu-Mir-199-P2-v2  Ocu-Mir-199-P2-v3  Sha-Mir-199-P2-v1  Sha-Mir-199-P2-v2  Sha-Mir-199-P2-v3  Xtr-Mir-199-P2 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(rheMac8)
chr19: 10858567-10858629 [-] UCSC Ensembl
Clustered MiRNAs
(< 10kb from Mir-199-P2-v1)
Mir-199-P2-v1 chr19: 10858567-10858629 [-] UCSC Ensembl
Mir-199-P2-v2 chr19: 10858567-10858629 [-] UCSC Ensembl
Mir-199-P2-v3 chr19: 10858567-10858629 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UGCUGCGGGAUGGACAGCCGGCCUCGCCAACCCAGUGUUCAGACUACCUGUUCAGGAGGCUCUCAACGUGUACAGUAGUCUGCACAUUGGUUAGGCUGGGCUUGGGUGAGCGGCGCGUCGAGA
Get precursor sequence
Structure
        10          20        30        40        50        60 
UGCUGCGGGAUGGACAG-  -|    C   AAC       U        C   U AGGAGGC 
                  CC GGCCU GCC   CCAGUGU CAGACUAC UGU C       U
                  GG UCGGG CGG   GGUUACA GUCUGAUG ACA G       C
AGAGCUGCGCGGCGAGUG  U^    U   AUU       C        -   U UGCAACU 
 120       110       100        90        80         70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
Bo Br Br Br He Ki Li Lu Ly Sk Sp Te Th
Star sequence

Mml-Mir-199-P2-v1_5p*

MirBase accessionMIMAT0006231
Sequence
0- CCCAGUGUUCAGACUACCUGUUC -23
Get sequence
Validated targets TargetScanVert: mml-miR-199a-5p
Mature sequence

Mml-Mir-199-P2-v1_3p

MirBase accessionMIMAT0006232
Sequence
41- ACAGUAGUCUGCACAUUGGUUA -63
Get sequence
Validated targets TargetScanVert: mml-miR-199a-3p