MirGeneDB 3.0
MirGeneDB ID

Mml-Mir-338-P2-as

Family name MIR-338 (all species)
Species Rhesus monkey (Macaca mulatta)
MiRBase ID
Paralogues Mml-Mir-338-P2 
Orthologues Aca-Mir-338-P2  Ami-Mir-338-P2  Bta-Mir-338-P2  Bta-Mir-338-P2-as  Cfa-Mir-338-P2  Cfa-Mir-338-P2-as  Cja-Mir-338-P2  Cli-Mir-338-P2  Cmi-Mir-338-P2  Cpi-Mir-338-P2  Cpi-Mir-338-P2-as  Cpo-Mir-338-P2  Dno-Mir-338-P2  Dre-Mir-338-P2a  Dre-Mir-338-P2b  Ebu-Mir-338-o2  Eca-Mir-338-P2  Eca-Mir-338-P2-as  Ete-Mir-338-P2  Ete-Mir-338-P2-as  Gga-Mir-338-P2  Gja-Mir-338-P2  Gmo-Mir-338-P2a  Gmo-Mir-338-P2b  Hsa-Mir-338-P2  Hsa-Mir-338-P2-as  Laf-Mir-338-P2  Lch-Mir-338-P2  Loc-Mir-338-P2  Mal-Mir-338-P2a  Mal-Mir-338-P2b  Mdo-Mir-338-P2  Mmr-Mir-338-P2  Mmu-Mir-338-P2  Mmu-Mir-338-P2-as  Mun-Mir-338-P2e  Mun-Mir-338-P2f  Neu-Mir-338-P2  Oan-Mir-338-P2  Ocu-Mir-338-P2  Pab-Mir-338-P2  Pab-Mir-338-P2-as  Pbv-Mir-338-P2  Rno-Mir-338-P2  Rno-Mir-338-P2-as  Sha-Mir-338-P2  Spt-Mir-338-P2  Sto-Mir-338-P2  Tgu-Mir-338-P2  Tgu-Mir-338-P2-as  Tni-Mir-338-P2a  Tni-Mir-338-P2b  Xla-Mir-338-P2c  Xla-Mir-338-P2d  Xtr-Mir-338-P2 
Node of Origin (locus) Amniota
Node of Origin (family) Vertebrata
Genome context
(GCA_003339765.3_Mmul_10_traces)		 CM014351.1: 77460701-77460763 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-338-P2-as)		 Mir-338-P2 CM014351.1: 77460701-77460759 [-] UCSC Ensembl
Mir-338-P2-as CM014351.1: 77460701-77460763 [+] UCSC Ensembl
Seed CAACAAA
Precursor
(pre-Mir +30nt flank)		 
GGCAGGUCGGGAGGCUGGCAGCUACCCUCUUCAACAAAAUCACUGAUGCUGGAGUCACCUGAGUCAUCACUCAGCACCAGGAUAUUGUUGGAGAGGACGGCCGUGCGGCAUCUGGGGCUGGUG
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Structure
        10          20        30        40        50        60  
GGCAGGUCGGGAGGCUG--| A   AC            A   A   A     G   CACCUG 
                   GC GCU  CCUCUUCAACAA AUC CUG UGCUG AGU      \
                   UG CGG  GGAGAGGUUGUU UAG GAC ACGAC UCA      A
GUGGUCGGGGUCUACGGCG^ C   CA            A   -   C     -   CUACUG 
 120       110       100        90         80         70
Deep sequencing
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3' NTU Yes
MotifsCNNC at 3p(+17)
Tissue expression
- +
Bo Br Br Br He Ki Li Lu Ly Sk Sp Te Th
Mature sequence

Mml-Mir-338-P2-as_5p
mirBase accessionNone
Sequence 
0- UCAACAAAAUCACUGAUGCUGGAGU -25
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Star sequence

Mml-Mir-338-P2-as_3p*
mirBase accessionNone
Sequence 
40- UCAGCACCAGGAUAUUGUUGGAG -63
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